BLASTX nr result
ID: Angelica27_contig00004353
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica27_contig00004353
(987 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017236035.1 PREDICTED: sm-like protein LSM4 [Daucus carota su... 181 2e-53
XP_010550988.1 PREDICTED: sm-like protein LSM4 [Tarenaya hassler... 180 4e-53
XP_010546724.1 PREDICTED: sm-like protein LSM4 [Tarenaya hassler... 180 4e-53
XP_002874352.1 hypothetical protein ARALYDRAFT_326933 [Arabidops... 180 5e-53
KNA20524.1 hypothetical protein SOVF_051390 isoform A [Spinacia ... 180 5e-53
KNA20525.1 hypothetical protein SOVF_051390 isoform B [Spinacia ... 180 5e-53
XP_010684532.1 PREDICTED: sm-like protein LSM4 [Beta vulgaris su... 180 5e-53
XP_003628456.2 u6 snRNA-associated-like-Smprotein [Medicago trun... 180 5e-53
XP_003630090.2 u6 snRNA-associated-like-Smprotein [Medicago trun... 180 6e-53
XP_003625914.1 u6 snRNA-associated-like-Smprotein [Medicago trun... 180 6e-53
CDY19734.1 BnaA09g03870D [Brassica napus] 179 7e-53
JAU14928.1 Sm-like protein LSM4 [Noccaea caerulescens] JAU51861.... 179 9e-53
XP_018454695.1 PREDICTED: sm-like protein LSM4 [Raphanus sativus] 179 9e-53
XP_018478727.1 PREDICTED: sm-like protein LSM4 [Raphanus sativus... 179 9e-53
XP_013595712.1 PREDICTED: sm-like protein LSM4 [Brassica olerace... 179 9e-53
XP_010493981.1 PREDICTED: sm-like protein LSM4 [Camelina sativa] 179 9e-53
XP_009151187.1 PREDICTED: sm-like protein LSM4 [Brassica rapa] X... 179 9e-53
NP_198124.1 Small nuclear ribonucleoprotein family protein [Arab... 179 9e-53
XP_006288890.1 hypothetical protein CARUB_v10002252mg [Capsella ... 179 9e-53
AAM65462.1 glycine rich protein-like [Arabidopsis thaliana] 179 9e-53
>XP_017236035.1 PREDICTED: sm-like protein LSM4 [Daucus carota subsp. sativus]
Length = 149
Score = 181 bits (459), Expect = 2e-53
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEKS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKS 84
>XP_010550988.1 PREDICTED: sm-like protein LSM4 [Tarenaya hassleriana]
Length = 136
Score = 180 bits (456), Expect = 4e-53
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEKS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKS 84
>XP_010546724.1 PREDICTED: sm-like protein LSM4 [Tarenaya hassleriana]
Length = 141
Score = 180 bits (456), Expect = 4e-53
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEKS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKS 84
>XP_002874352.1 hypothetical protein ARALYDRAFT_326933 [Arabidopsis lyrata subsp.
lyrata] EFH50611.1 hypothetical protein
ARALYDRAFT_326933 [Arabidopsis lyrata subsp. lyrata]
Length = 143
Score = 180 bits (456), Expect = 5e-53
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEKS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKS 84
>KNA20524.1 hypothetical protein SOVF_051390 isoform A [Spinacia oleracea]
Length = 144
Score = 180 bits (456), Expect = 5e-53
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEKS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKS 84
>KNA20525.1 hypothetical protein SOVF_051390 isoform B [Spinacia oleracea]
Length = 145
Score = 180 bits (456), Expect = 5e-53
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEKS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKS 84
>XP_010684532.1 PREDICTED: sm-like protein LSM4 [Beta vulgaris subsp. vulgaris]
KMT06000.1 hypothetical protein BVRB_7g164860 [Beta
vulgaris subsp. vulgaris]
Length = 145
Score = 180 bits (456), Expect = 5e-53
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEKS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKS 84
>XP_003628456.2 u6 snRNA-associated-like-Smprotein [Medicago truncatula]
XP_013445372.1 u6 snRNA-associated-like-Smprotein
[Medicago truncatula] KEH19398.1 u6
snRNA-associated-like-Smprotein [Medicago truncatula]
AET02932.2 u6 snRNA-associated-like-Smprotein [Medicago
truncatula]
Length = 146
Score = 180 bits (456), Expect = 5e-53
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEKS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKS 84
>XP_003630090.2 u6 snRNA-associated-like-Smprotein [Medicago truncatula] AET04566.2
u6 snRNA-associated-like-Smprotein [Medicago truncatula]
Length = 150
Score = 180 bits (456), Expect = 6e-53
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEKS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKS 84
>XP_003625914.1 u6 snRNA-associated-like-Smprotein [Medicago truncatula] AES82132.1
u6 snRNA-associated-like-Smprotein [Medicago truncatula]
Length = 150
Score = 180 bits (456), Expect = 6e-53
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEKS
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKS 84
>CDY19734.1 BnaA09g03870D [Brassica napus]
Length = 133
Score = 179 bits (454), Expect = 7e-53
Identities = 82/86 (95%), Positives = 85/86 (98%)
Frame = +1
Query: 205 KNMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPE 384
+ MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPE
Sbjct: 3 EKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE 62
Query: 385 CYIRGNTIKYLRVPDEVIDKVQEEKS 462
CYIRGNTIKYLRVPDEVIDKVQEEK+
Sbjct: 63 CYIRGNTIKYLRVPDEVIDKVQEEKT 88
>JAU14928.1 Sm-like protein LSM4 [Noccaea caerulescens] JAU51861.1 Sm-like
protein LSM4 [Noccaea caerulescens] JAU60712.1 Sm-like
protein LSM4 [Noccaea caerulescens] JAU93288.1 Sm-like
protein LSM4 [Noccaea caerulescens]
Length = 129
Score = 179 bits (453), Expect = 9e-53
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEK+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKT 84
>XP_018454695.1 PREDICTED: sm-like protein LSM4 [Raphanus sativus]
Length = 129
Score = 179 bits (453), Expect = 9e-53
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEK+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKT 84
>XP_018478727.1 PREDICTED: sm-like protein LSM4 [Raphanus sativus] XP_018478728.1
PREDICTED: sm-like protein LSM4 [Raphanus sativus]
Length = 129
Score = 179 bits (453), Expect = 9e-53
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEK+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKT 84
>XP_013595712.1 PREDICTED: sm-like protein LSM4 [Brassica oleracea var. oleracea]
XP_013595713.1 PREDICTED: sm-like protein LSM4 [Brassica
oleracea var. oleracea] XP_013643934.1 PREDICTED:
sm-like protein LSM4 [Brassica napus]
Length = 129
Score = 179 bits (453), Expect = 9e-53
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEK+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKT 84
>XP_010493981.1 PREDICTED: sm-like protein LSM4 [Camelina sativa]
Length = 129
Score = 179 bits (453), Expect = 9e-53
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEK+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKT 84
>XP_009151187.1 PREDICTED: sm-like protein LSM4 [Brassica rapa] XP_009151188.1
PREDICTED: sm-like protein LSM4 [Brassica rapa]
XP_009111743.1 PREDICTED: sm-like protein LSM4 [Brassica
rapa] XP_013613180.1 PREDICTED: sm-like protein LSM4
[Brassica oleracea var. oleracea] XP_013703698.1
PREDICTED: sm-like protein LSM4 [Brassica napus]
Length = 129
Score = 179 bits (453), Expect = 9e-53
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEK+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKT 84
>NP_198124.1 Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana] F4K4E3.1 RecName: Full=Sm-like protein LSM4;
Short=AtLSM4; AltName: Full=Protein EMBRYO DEFECTIVE
1644; AltName: Full=U6 snRNA-associated Sm-like protein
LSM4 AED93718.1 Small nuclear ribonucleoprotein family
protein [Arabidopsis thaliana] OAO92904.1 LSM4
[Arabidopsis thaliana]
Length = 129
Score = 179 bits (453), Expect = 9e-53
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEK+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKT 84
>XP_006288890.1 hypothetical protein CARUB_v10002252mg [Capsella rubella]
XP_010455092.1 PREDICTED: sm-like protein LSM4 [Camelina
sativa] EOA21788.1 hypothetical protein
CARUB_v10002252mg [Capsella rubella]
Length = 129
Score = 179 bits (453), Expect = 9e-53
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEK+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKT 84
>AAM65462.1 glycine rich protein-like [Arabidopsis thaliana]
Length = 129
Score = 179 bits (453), Expect = 9e-53
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +1
Query: 211 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 390
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 391 IRGNTIKYLRVPDEVIDKVQEEKS 462
IRGNTIKYLRVPDEVIDKVQEEK+
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKT 84