BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica27_contig00002029
         (1440 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017249104.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   624   0.0  
XP_002985091.1 hypothetical protein SELMODRAFT_44317, partial [S...   337   e-109
XP_002986271.1 hypothetical protein SELMODRAFT_44320, partial [S...   337   e-109
XP_003610354.1 tRNA pseudouridine synthase [Medicago truncatula]...   289   1e-90
XP_004292926.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   296   1e-90
XP_017254952.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   293   3e-90
XP_002300673.2 hypothetical protein POPTR_0002s01580g [Populus t...   289   1e-88
ACJ85562.1 unknown [Medicago truncatula] AFK33588.1 unknown [Med...   290   1e-88
GAU22354.1 hypothetical protein TSUD_106810 [Trifolium subterran...   288   1e-88
XP_003610356.1 tRNA pseudouridine synthase A, related protein [M...   289   1e-88
XP_003610360.1 tRNA pseudouridine synthase A, related protein [M...   289   1e-88
XP_003063733.1 predicted protein, partial [Micromonas pusilla CC...   282   2e-88
GAU22353.1 hypothetical protein TSUD_106820 [Trifolium subterran...   288   3e-88
OAY22560.1 hypothetical protein MANES_18G008300 [Manihot esculenta]   289   3e-88
CBI18897.3 unnamed protein product, partial [Vitis vinifera]          284   5e-88
XP_002307759.2 hypothetical protein POPTR_0005s26830g [Populus t...   286   9e-88
XP_006575306.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   286   1e-87
XP_003519139.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   286   3e-87
XP_011034929.1 PREDICTED: tRNA pseudouridine synthase A, mitocho...   286   4e-87
KHN42806.1 tRNA pseudouridine synthase 1 [Glycine soja]               286   4e-87

>XP_017249104.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Daucus
            carota subsp. sativus] XP_017249105.1 PREDICTED: tRNA
            pseudouridine synthase A, mitochondrial-like [Daucus
            carota subsp. sativus] XP_017249106.1 PREDICTED: tRNA
            pseudouridine synthase A, mitochondrial-like [Daucus
            carota subsp. sativus] XP_017249107.1 PREDICTED: tRNA
            pseudouridine synthase A, mitochondrial-like [Daucus
            carota subsp. sativus] XP_017249108.1 PREDICTED: tRNA
            pseudouridine synthase A, mitochondrial-like [Daucus
            carota subsp. sativus] XP_017249109.1 PREDICTED: tRNA
            pseudouridine synthase A, mitochondrial-like [Daucus
            carota subsp. sativus] XP_017249110.1 PREDICTED: tRNA
            pseudouridine synthase A, mitochondrial-like [Daucus
            carota subsp. sativus]
          Length = 417

 Score =  624 bits (1610), Expect = 0.0
 Identities = 320/415 (77%), Positives = 354/415 (85%), Gaps = 20/415 (4%)
 Frame = +2

Query: 68   PEEPSSKKLKTSP-----KYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEADLEQALYLSG 232
            PEEP+SKKLKTSP     KYKRRKIA+F GYCG GYQGMQKNIGAKTIEADLE+ALYLS 
Sbjct: 9    PEEPTSKKLKTSPSYKTPKYKRRKIALFFGYCGAGYQGMQKNIGAKTIEADLEEALYLSA 68

Query: 233  AIPEQDKDHPKRFDWSRSARTDKGVSAVCQVVSGSFYIHPPGLVDRVNAHLSWQFRVFGY 412
            AIPEQD+ HPKR DWSRSARTDKGVSAVCQVVSGSFYI PPGL++R++ HLS QFRVFGY
Sbjct: 69   AIPEQDRGHPKRLDWSRSARTDKGVSAVCQVVSGSFYIDPPGLIERLHRHLSSQFRVFGY 128

Query: 413  KRVTPSFNAQRFCDRRRYVYLLPVFAIDGKCDVPVHSDILSNSCN---VEGKCDASRFCY 583
            KRV PSF+AQRFCDRRRYVYLLPVF  D +        +LSN  +   VEG+CD  RFCY
Sbjct: 129  KRVAPSFSAQRFCDRRRYVYLLPVFVFDLR-------RVLSNCESGNVVEGECDVDRFCY 181

Query: 584  GGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSANDTVVVDRIEFVKCEV 763
            G E KERFNRILKCY+GTHNFHNFTTRIKAEDPSSQRFIVSFSA+DTVVVD IEFVKC+V
Sbjct: 182  GEEEKERFNRILKCYEGTHNFHNFTTRIKAEDPSSQRFIVSFSASDTVVVDGIEFVKCQV 241

Query: 764  VGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPTAPEVGLYLDECFFTSY 943
            VGQSFMLHQIRKLIGFAVLVMRN VPESLI+IAL+KDVNITVPTAPEVGL+LDECFFTSY
Sbjct: 242  VGQSFMLHQIRKLIGFAVLVMRNIVPESLIKIALQKDVNITVPTAPEVGLFLDECFFTSY 301

Query: 944  NKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVALWLQSLDHENYRELSAV 1123
            NKKWKE+HG+LSMKDYE+ AE+FK+KHIYSHIALTE K+RVV LWLQSL+HENY ELS  
Sbjct: 302  NKKWKEVHGELSMKDYEKEAEEFKMKHIYSHIALTERKDRVVGLWLQSLNHENYSELSVA 361

Query: 1124 ASSK--TKENSEVQITTRENSSEVEIAADLKS----------AAGLKTAEVEVLL 1252
            +SSK    ++SEV+ TT + SSE+EIAADLKS          A  LKTAEVEV++
Sbjct: 362  SSSKIANLKDSEVRRTTNDKSSELEIAADLKSPEAKVTTDALALKLKTAEVEVVV 416


>XP_002985091.1 hypothetical protein SELMODRAFT_44317, partial [Selaginella
            moellendorffii] EFJ13966.1 hypothetical protein
            SELMODRAFT_44317, partial [Selaginella moellendorffii]
          Length = 363

 Score =  337 bits (863), Expect = e-109
 Identities = 175/361 (48%), Positives = 231/361 (63%), Gaps = 32/361 (8%)
 Frame = +2

Query: 119  RKIAIFVGYCGVGYQGMQKNIGAKTIEADLEQALYLSGAIPEQDKDHPKRFDWSRSARTD 298
            RKIAIFV Y G GYQGMQ+N G KTIE DLE+AL+ +GAI E     P++ DW+R+ARTD
Sbjct: 1    RKIAIFVSYSGYGYQGMQRNKGCKTIEGDLEEALFKAGAIAESTFGDPRKIDWARAARTD 60

Query: 299  KGVSAVCQVVSGSFYIHPPGLVDRVNAHLSWQFRVFGYKRVTPSFNAQRFCDRRRYVYLL 478
            KGVSA  QVVSG F++ PPG V+RVN+HL  Q RV G+ RVT +F+A+  CDRRRY Y+L
Sbjct: 61   KGVSAAGQVVSGRFFVDPPGFVERVNSHLPKQIRVLGFTRVTGTFSAKNLCDRRRYEYVL 120

Query: 479  PVFAID---GKCDVP-------------------VHSDILSNSCNVEGK------CDAS- 571
            PVFA+D    + + P                   V  D  S +    G+      C +S 
Sbjct: 121  PVFALDPASHRVESPTIEAANPGDNPGEAITSEDVEEDTTSTTGTTTGRFTPTCTCTSSD 180

Query: 572  ---RFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSANDTVVVDRI 742
                F +G E + +  +IL+ Y GT  FHNFT R+K EDPS+QR+I S+ A +   +   
Sbjct: 181  LETGFTFGDEERAKLTKILQNYVGTRYFHNFTCRVKPEDPSTQRYITSYEAGEVFTIQGC 240

Query: 743  EFVKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPTAPEVGLYLD 922
            +FV+C V+GQSFMLHQIRK+IG AV VMR   PE++ E A R+D  I VP APE+GL+LD
Sbjct: 241  KFVRCTVIGQSFMLHQIRKMIGLAVAVMRGDAPETIFERAFRRDTKIGVPMAPELGLFLD 300

Query: 923  ECFFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVALWLQSLDHEN 1102
            EC +T+YN+++   H ++S+K +E+   +FK + IY HIA TE K+ V A WL  L  E 
Sbjct: 301  ECLYTAYNQRFAGSHEEVSLKSFEKEIAEFKTEVIYPHIASTEAKDGVFARWLHGLTKER 360

Query: 1103 Y 1105
            Y
Sbjct: 361  Y 361


>XP_002986271.1 hypothetical protein SELMODRAFT_44320, partial [Selaginella
            moellendorffii] EFJ12802.1 hypothetical protein
            SELMODRAFT_44320, partial [Selaginella moellendorffii]
          Length = 363

 Score =  337 bits (863), Expect = e-109
 Identities = 175/361 (48%), Positives = 231/361 (63%), Gaps = 32/361 (8%)
 Frame = +2

Query: 119  RKIAIFVGYCGVGYQGMQKNIGAKTIEADLEQALYLSGAIPEQDKDHPKRFDWSRSARTD 298
            RKIAIFV Y G GYQGMQ+N G KTIE DLE+AL+ +GAI E     P++ DW+R+ARTD
Sbjct: 1    RKIAIFVSYSGYGYQGMQRNKGCKTIEGDLEEALFKAGAIAESTFGDPRKIDWARAARTD 60

Query: 299  KGVSAVCQVVSGSFYIHPPGLVDRVNAHLSWQFRVFGYKRVTPSFNAQRFCDRRRYVYLL 478
            KGVSA  QVVSG F++ PPG V+RVN+HL  Q RV G+ RVT +F+A+  CDRRRY Y+L
Sbjct: 61   KGVSAAGQVVSGRFFVDPPGFVERVNSHLPKQIRVLGFTRVTGTFSAKNLCDRRRYEYVL 120

Query: 479  PVFAID---GKCDVP-------------------VHSDILSNSCNVEGK------CDAS- 571
            PVFA+D    + + P                   V  D  S +    G+      C +S 
Sbjct: 121  PVFALDPASHRVESPTIEAANPGDNLGEAITSEDVEEDTTSTTGTTTGRFTPTCTCTSSD 180

Query: 572  ---RFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSANDTVVVDRI 742
                F +G E + +  +IL+ Y GT  FHNFT R+K EDPS+QR+I S+ A +   +   
Sbjct: 181  LETGFTFGDEERAKLTKILQNYVGTRYFHNFTCRVKPEDPSTQRYITSYEAGEVFTIQGC 240

Query: 743  EFVKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPTAPEVGLYLD 922
            +FV+C V+GQSFMLHQIRK+IG AV VMR   PE++ E A R+D  I VP APE+GL+LD
Sbjct: 241  KFVRCTVIGQSFMLHQIRKMIGLAVAVMRGDAPETIFERAFRRDTKIGVPMAPELGLFLD 300

Query: 923  ECFFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVALWLQSLDHEN 1102
            EC +T+YN+++   H ++S+K +E+   +FK + IY HIA TE K+ V A WL  L  E 
Sbjct: 301  ECLYTAYNQRFAGSHEEVSLKSFEKEIAEFKTEVIYPHIASTEAKDGVFARWLHGLTKER 360

Query: 1103 Y 1105
            Y
Sbjct: 361  Y 361


>XP_003610354.1 tRNA pseudouridine synthase [Medicago truncatula] AES92551.1 tRNA
            pseudouridine synthase [Medicago truncatula]
          Length = 361

 Score =  289 bits (740), Expect = 1e-90
 Identities = 134/214 (62%), Positives = 170/214 (79%)
 Frame = +2

Query: 563  DASRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSANDTVVVDRI 742
            + S FCYG + +ERFN ILKCY GTHNFHNFTTRIK EDPS++RFI+SF A+ TVVV+ +
Sbjct: 148  NGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTVVVEGM 207

Query: 743  EFVKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPTAPEVGLYLD 922
            EFVKCE+VGQSFMLHQIRK++G AV +MRN  PESLIE AL+KDV+ITVPTAPEVGLYLD
Sbjct: 208  EFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLD 267

Query: 923  ECFFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVALWLQSLDHEN 1102
            ECFFTSYN+KWK+ H ++SMK YE+ AEDFK+++IY HIA TE+KE  V LWL SL+H N
Sbjct: 268  ECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRN 327

Query: 1103 YRELSAVASSKTKENSEVQITTRENSSEVEIAAD 1204
            Y +L  +       + +V++   +  +E+E+  +
Sbjct: 328  YPDLRILDGEGVTNDKKVEVDMNDKKTEIEVVTE 361


>XP_004292926.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 591

 Score =  296 bits (759), Expect = 1e-90
 Identities = 150/261 (57%), Positives = 191/261 (73%), Gaps = 11/261 (4%)
 Frame = +2

Query: 491  IDGKCDVPVHSDILSNSCNVEG----KCDASRFCYGGEVKERFNRILKCYQGTHNFHNFT 658
            I+G+ +V V +  ++++  V G      + S FCYG + KERFNRIL CYQGTHNFHNFT
Sbjct: 246  IEGEDNVVVGNADMNSAEEVNGGEKKAVEGSGFCYGEKEKERFNRILSCYQGTHNFHNFT 305

Query: 659  TRIKAEDPSSQRFIVSFSANDTVVVDRIEFVKCEVVGQSFMLHQIRKLIGFAVLVMRNFV 838
            TR KAEDP++ R+I+SFSAN TV V+ IEFVKCEVVGQSFMLHQIRKLIG AV +MRN  
Sbjct: 306  TRTKAEDPAAIRYIISFSANATVTVEGIEFVKCEVVGQSFMLHQIRKLIGLAVAIMRNCA 365

Query: 839  PESLIEIALRKDVNITVPTAPEVGLYLDECFFTSYNKKWKEIHGDLSMKDYEEAAEDFKI 1018
            PESL+E AL+KDVN+ VPTAPEVGLYLDECFF+SYN+KW + H ++SMK YE  AE FK+
Sbjct: 366  PESLLERALQKDVNVNVPTAPEVGLYLDECFFSSYNQKWGDTHEEVSMKGYEAEAEAFKM 425

Query: 1019 KHIYSHIALTEHKERVVALWLQSLDHENYRELSAVASSKTKENSEVQITTRENSSE---- 1186
            KHIY+HI  TEHKE VV LWL SL+H NY +L A  +  T      +I++ +N+ +    
Sbjct: 426  KHIYTHIGATEHKEGVVGLWLHSLNHRNYPDLGAENNGDTSNGKTAEISSTDNNGDTINC 485

Query: 1187 --VEIAADLK-SAAGLKTAEV 1240
               +I+AD     + +KTA++
Sbjct: 486  KTADISADNNGDTSNVKTADI 506



 Score =  221 bits (563), Expect = 6e-62
 Identities = 107/157 (68%), Positives = 125/157 (79%), Gaps = 15/157 (9%)
 Frame = +2

Query: 71  EEPSSKKLKTSP---------------KYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEAD 205
           ++P  KKLK S                + KRRK+AIF  YCGVGYQGMQKN GAKTIE D
Sbjct: 20  QQPDPKKLKMSTTTTDDEQTAATTQKQRLKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGD 79

Query: 206 LEQALYLSGAIPEQDKDHPKRFDWSRSARTDKGVSAVCQVVSGSFYIHPPGLVDRVNAHL 385
           LE+ALYLSGA+PEQD+ +PKR+DW+RSARTDKGVSAV QVVSG FY+ PPG VDR+N+HL
Sbjct: 80  LEEALYLSGAVPEQDRSNPKRYDWARSARTDKGVSAVGQVVSGRFYVDPPGFVDRLNSHL 139

Query: 386 SWQFRVFGYKRVTPSFNAQRFCDRRRYVYLLPVFAID 496
           S Q R+FGYKRVT SFNA++FCDRRRYVYL+PVFA+D
Sbjct: 140 SPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALD 176


>XP_017254952.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Daucus
            carota subsp. sativus] KZM89633.1 hypothetical protein
            DCAR_023004 [Daucus carota subsp. sativus]
          Length = 497

 Score =  293 bits (749), Expect = 3e-90
 Identities = 142/233 (60%), Positives = 176/233 (75%), Gaps = 2/233 (0%)
 Frame = +2

Query: 548  VEGKCDASRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSANDTV 727
            ++ + + S F YG + K+RFN ILK Y+GTHN+HNFTTR KA+DPS+ R+I+SF A+ TV
Sbjct: 263  IDVELNESGFTYGEKEKQRFNNILKSYEGTHNYHNFTTRTKADDPSAHRYIISFKADTTV 322

Query: 728  VVDRIEFVKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPTAPEV 907
             VD IEF+KCEVVGQSFMLHQIRK+IG AV +MRN  PES I+IAL+KD+NITVP APEV
Sbjct: 323  TVDGIEFIKCEVVGQSFMLHQIRKMIGVAVAIMRNCAPESFIDIALQKDINITVPMAPEV 382

Query: 908  GLYLDECFFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVALWLQS 1087
            GLYLDECFFTSYN+KWK+ H ++SM DYE  AEDFKIKHIYSHIA +EHK+  V LWL S
Sbjct: 383  GLYLDECFFTSYNQKWKDSHEEVSMNDYEAEAEDFKIKHIYSHIASSEHKDGAVGLWLHS 442

Query: 1088 LDHENYRELSAVASSK--TKENSEVQITTRENSSEVEIAADLKSAAGLKTAEV 1240
            L++ NY +L    + K    +N EV+ITT    SE E+++        K AEV
Sbjct: 443  LNYRNYPDLLVTTNDKKPVMKNDEVEITTNGRGSEAEVSSAEVKVTTEKDAEV 495



 Score =  195 bits (496), Expect = 5e-53
 Identities = 98/145 (67%), Positives = 115/145 (79%), Gaps = 4/145 (2%)
 Frame = +2

Query: 74  EPSSKKLKTSP---KYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEADLEQALYLSGAIPE 244
           E + KK K S    + KRRKIAI   YCGVGYQGMQKN GAKTIE DLE+AL+ +GA+PE
Sbjct: 13  EVNPKKQKMSSDEVRPKRRKIAILFAYCGVGYQGMQKNPGAKTIEGDLEEALFQAGAVPE 72

Query: 245 QDKDHPKRFDWSRSARTDKGVSAVCQVVSGSFYIHP-PGLVDRVNAHLSWQFRVFGYKRV 421
            D+  PKRFDW+RSARTDKGVSAV QVVSG FYI P    + R+ +HL  QF++FGYKRV
Sbjct: 73  HDRGIPKRFDWARSARTDKGVSAVGQVVSGKFYIDPTDSFIPRLQSHLPIQFKIFGYKRV 132

Query: 422 TPSFNAQRFCDRRRYVYLLPVFAID 496
           T SFNA++FCDRRRYVY+LPVFA+D
Sbjct: 133 TASFNAKKFCDRRRYVYMLPVFALD 157


>XP_002300673.2 hypothetical protein POPTR_0002s01580g [Populus trichocarpa]
            EEE79946.2 hypothetical protein POPTR_0002s01580g
            [Populus trichocarpa]
          Length = 516

 Score =  289 bits (740), Expect = 1e-88
 Identities = 143/204 (70%), Positives = 166/204 (81%)
 Frame = +2

Query: 569  SRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSANDTVVVDRIEF 748
            S FCYG + KERFNRIL  Y G+HNFHNFTTR KAEDPS++R+IVSF A  TV V+ IEF
Sbjct: 303  SSFCYGEKEKERFNRILGYYVGSHNFHNFTTRTKAEDPSARRYIVSFEAKTTVNVEGIEF 362

Query: 749  VKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPTAPEVGLYLDEC 928
            VKCEVVGQSFMLHQIRK+IG AV +MRN  PESLI+ AL+KDVNI VPTAPEVGLYLDEC
Sbjct: 363  VKCEVVGQSFMLHQIRKMIGVAVAIMRNCAPESLIQTALQKDVNINVPTAPEVGLYLDEC 422

Query: 929  FFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVALWLQSLDHENYR 1108
            FFTSYN+KWK+ H ++SMKDYEE AEDFK+KHIYSHIA TEHKE  VALWL SL+H NY 
Sbjct: 423  FFTSYNQKWKDSHEEISMKDYEEEAEDFKMKHIYSHIATTEHKEGSVALWLHSLNHRNYP 482

Query: 1109 ELSAVASSKTKENSEVQITTRENS 1180
            +L  V+++    NSE     +E++
Sbjct: 483  DL-RVSNTVDNNNSEDNKNGKEST 505



 Score =  193 bits (490), Expect = 5e-52
 Identities = 92/129 (71%), Positives = 108/129 (83%)
 Frame = +2

Query: 77  PSSKKLKTSPKYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEADLEQALYLSGAIPEQDKD 256
           P         +YKRRKIAIF  YCGVGYQGMQKN GAKTIE DLE+AL+ +GA+PEQD+ 
Sbjct: 40  PGGDTTTKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEQDRG 99

Query: 257 HPKRFDWSRSARTDKGVSAVCQVVSGSFYIHPPGLVDRVNAHLSWQFRVFGYKRVTPSFN 436
            PKR+DW+RSARTDKGVSAV QVVSG FYI PPGLV+R++++LS QFR+FGYKRVT SFN
Sbjct: 100 IPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLHSNLSPQFRIFGYKRVTGSFN 159

Query: 437 AQRFCDRRR 463
           A++FCDRRR
Sbjct: 160 AKKFCDRRR 168


>ACJ85562.1 unknown [Medicago truncatula] AFK33588.1 unknown [Medicago
            truncatula]
          Length = 530

 Score =  290 bits (741), Expect = 1e-88
 Identities = 134/214 (62%), Positives = 170/214 (79%)
 Frame = +2

Query: 563  DASRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSANDTVVVDRI 742
            + S FCYG + +ERFN ILKCY GTHNFHNFTTRIK EDPS++RFI+SF A+ TVVV+ +
Sbjct: 317  NGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTVVVEGM 376

Query: 743  EFVKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPTAPEVGLYLD 922
            EFVKCE+VGQSFMLHQIRK++G AV +MRN  PESLIE AL+KDV+ITVPTAPEVGLYLD
Sbjct: 377  EFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLD 436

Query: 923  ECFFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVALWLQSLDHEN 1102
            ECFFTSYN+KWK+ H ++SMK YE+ AEDFK+++IY HIA TE+KE  V LWL SL+H N
Sbjct: 437  ECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRN 496

Query: 1103 YRELSAVASSKTKENSEVQITTRENSSEVEIAAD 1204
            Y +L  +       + +V++   +  +E+E+  +
Sbjct: 497  YPDLGILDGEGVTNDKKVEVDMNDKKTEIEVVTE 530



 Score =  213 bits (541), Expect = 3e-59
 Identities = 104/161 (64%), Positives = 126/161 (78%), Gaps = 16/161 (9%)
 Frame = +2

Query: 71  EEPSSKKLKTSP----------------KYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEA 202
           EEP++KK+K S                 +YKRRK+AIF  YCGVGYQGMQKN GAKTIE 
Sbjct: 22  EEPATKKVKMSTTTSDDEGCTTAEGSKVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEG 81

Query: 203 DLEQALYLSGAIPEQDKDHPKRFDWSRSARTDKGVSAVCQVVSGSFYIHPPGLVDRVNAH 382
           +LE+ALY+SGA+PEQD+   KR+DW+RSARTDKGVSAV QVVSG FYI PPG VDR+N++
Sbjct: 82  ELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSN 141

Query: 383 LSWQFRVFGYKRVTPSFNAQRFCDRRRYVYLLPVFAIDGKC 505
           L  Q R+FG+KRVT SF+A++FCDRRRYVYL+PVFA+D  C
Sbjct: 142 LPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCC 182


>GAU22354.1 hypothetical protein TSUD_106810 [Trifolium subterraneum]
          Length = 498

 Score =  288 bits (738), Expect = 1e-88
 Identities = 136/212 (64%), Positives = 168/212 (79%)
 Frame = +2

Query: 569  SRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSANDTVVVDRIEF 748
            S F YG + KERFN+ILK Y GTHNFHNFTTRIK EDPS+ RFI+SF A+ TVVV+ +EF
Sbjct: 287  SGFSYGEKEKERFNKILKSYVGTHNFHNFTTRIKPEDPSAHRFIISFDASTTVVVEGMEF 346

Query: 749  VKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPTAPEVGLYLDEC 928
            VKCE+VGQSFMLHQIRK++G AV +MRN  PESLIE AL+KDV+ITVPTAPEVGLYLDEC
Sbjct: 347  VKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLDEC 406

Query: 929  FFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVALWLQSLDHENYR 1108
            FFTSYN+KWK+ H ++SMK YE+ AEDFK+KHIYSHIA TE+K+  V LWL SL+H NY 
Sbjct: 407  FFTSYNQKWKDTHEEVSMKAYEKEAEDFKMKHIYSHIASTEYKDGTVGLWLHSLNHRNYP 466

Query: 1109 ELSAVASSKTKENSEVQITTRENSSEVEIAAD 1204
            +L  +       + + +I T +  +E+E+  +
Sbjct: 467  DLRILDEEGVTNDKKTEIDTNDKKTEIEVVTE 498



 Score =  207 bits (528), Expect = 1e-57
 Identities = 96/136 (70%), Positives = 117/136 (86%)
 Frame = +2

Query: 98  TSPKYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEADLEQALYLSGAIPEQDKDHPKRFDW 277
           T  +YKRRK+AIF  YCGVGYQGMQKN GAKTIE +LE+ALY+SGA+PEQD+   KR+DW
Sbjct: 17  TKIRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDW 76

Query: 278 SRSARTDKGVSAVCQVVSGSFYIHPPGLVDRVNAHLSWQFRVFGYKRVTPSFNAQRFCDR 457
           +RSARTDKGVSAV QVVSG FYI PPG ++R+N++L  Q R+FG+KRVT SF+A++FCDR
Sbjct: 77  ARSARTDKGVSAVGQVVSGRFYIDPPGFIERLNSNLPSQIRIFGFKRVTASFSAKKFCDR 136

Query: 458 RRYVYLLPVFAIDGKC 505
           RRYVYL+PVFA+D  C
Sbjct: 137 RRYVYLIPVFALDPCC 152


>XP_003610356.1 tRNA pseudouridine synthase A, related protein [Medicago truncatula]
            AES92553.1 tRNA pseudouridine synthase A, related protein
            [Medicago truncatula]
          Length = 530

 Score =  289 bits (740), Expect = 1e-88
 Identities = 134/214 (62%), Positives = 170/214 (79%)
 Frame = +2

Query: 563  DASRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSANDTVVVDRI 742
            + S FCYG + +ERFN ILKCY GTHNFHNFTTRIK EDPS++RFI+SF A+ TVVV+ +
Sbjct: 317  NGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTVVVEGM 376

Query: 743  EFVKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPTAPEVGLYLD 922
            EFVKCE+VGQSFMLHQIRK++G AV +MRN  PESLIE AL+KDV+ITVPTAPEVGLYLD
Sbjct: 377  EFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLD 436

Query: 923  ECFFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVALWLQSLDHEN 1102
            ECFFTSYN+KWK+ H ++SMK YE+ AEDFK+++IY HIA TE+KE  V LWL SL+H N
Sbjct: 437  ECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRN 496

Query: 1103 YRELSAVASSKTKENSEVQITTRENSSEVEIAAD 1204
            Y +L  +       + +V++   +  +E+E+  +
Sbjct: 497  YPDLRILDGEGVTNDKKVEVDMNDKKTEIEVVTE 530



 Score =  213 bits (541), Expect = 3e-59
 Identities = 104/161 (64%), Positives = 126/161 (78%), Gaps = 16/161 (9%)
 Frame = +2

Query: 71  EEPSSKKLKTSP----------------KYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEA 202
           EEP++KK+K S                 +YKRRK+AIF  YCGVGYQGMQKN GAKTIE 
Sbjct: 22  EEPATKKVKMSTTTSDDEGCTTAEGSKVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEG 81

Query: 203 DLEQALYLSGAIPEQDKDHPKRFDWSRSARTDKGVSAVCQVVSGSFYIHPPGLVDRVNAH 382
           +LE+ALY+SGA+PEQD+   KR+DW+RSARTDKGVSAV QVVSG FYI PPG VDR+N++
Sbjct: 82  ELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSN 141

Query: 383 LSWQFRVFGYKRVTPSFNAQRFCDRRRYVYLLPVFAIDGKC 505
           L  Q R+FG+KRVT SF+A++FCDRRRYVYL+PVFA+D  C
Sbjct: 142 LPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCC 182


>XP_003610360.1 tRNA pseudouridine synthase A, related protein [Medicago truncatula]
            AES92557.1 tRNA pseudouridine synthase A, related protein
            [Medicago truncatula] AFK43176.1 unknown [Medicago
            truncatula]
          Length = 530

 Score =  289 bits (740), Expect = 1e-88
 Identities = 134/214 (62%), Positives = 170/214 (79%)
 Frame = +2

Query: 563  DASRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSANDTVVVDRI 742
            + S FCYG + +ERFN ILKCY GTHNFHNFTTRIK EDPS++RFI+SF A+ TVVV+ +
Sbjct: 317  NGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTVVVEGM 376

Query: 743  EFVKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPTAPEVGLYLD 922
            EFVKCE+VGQSFMLHQIRK++G AV +MRN  PESLIE AL+KDV+ITVPTAPEVGLYLD
Sbjct: 377  EFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLD 436

Query: 923  ECFFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVALWLQSLDHEN 1102
            ECFFTSYN+KWK+ H ++SMK YE+ AEDFK+++IY HIA TE+KE  V LWL SL+H N
Sbjct: 437  ECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHSLNHRN 496

Query: 1103 YRELSAVASSKTKENSEVQITTRENSSEVEIAAD 1204
            Y +L  +       + +V++   +  +E+E+  +
Sbjct: 497  YPDLRILDGEGVTNDKKVEVDMNDKKTEIEVVTE 530



 Score =  213 bits (541), Expect = 3e-59
 Identities = 104/161 (64%), Positives = 126/161 (78%), Gaps = 16/161 (9%)
 Frame = +2

Query: 71  EEPSSKKLKTSP----------------KYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEA 202
           EEP++KK+K S                 +YKRRK+AIF  YCGVGYQGMQKN GAKTIE 
Sbjct: 22  EEPATKKVKMSTTTSDDEGCTTAEGSKVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEG 81

Query: 203 DLEQALYLSGAIPEQDKDHPKRFDWSRSARTDKGVSAVCQVVSGSFYIHPPGLVDRVNAH 382
           +LE+ALY+SGA+PEQD+   KR+DW+RSARTDKGVSAV QVVSG FYI PPG VDR+N++
Sbjct: 82  ELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSN 141

Query: 383 LSWQFRVFGYKRVTPSFNAQRFCDRRRYVYLLPVFAIDGKC 505
           L  Q R+FG+KRVT SF+A++FCDRRRYVYL+PVFA+D  C
Sbjct: 142 LPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCC 182


>XP_003063733.1 predicted protein, partial [Micromonas pusilla CCMP1545] EEH52106.1
            predicted protein, partial [Micromonas pusilla CCMP1545]
          Length = 313

 Score =  282 bits (721), Expect = 2e-88
 Identities = 152/326 (46%), Positives = 207/326 (63%), Gaps = 1/326 (0%)
 Frame = +2

Query: 116  RRKIAIFVGYCGVGYQGMQKNIGAKTIEADLEQALYLSGAIPEQDKDHPKRFDWSRSART 295
            +RK+AIF+ Y G GYQGMQ+N GA TIE +LE+A+  +G I + +     +  W R+ART
Sbjct: 1    KRKVAIFLAYVGKGYQGMQRNPGAVTIEDELEKAIVAAGGISDLNAGDFAKVQWMRAART 60

Query: 296  DKGVSAVCQVVSGSFYIHPPGLVDRVNAHLSWQFRVFGYKRVTPSFNAQRFCDRRRYVYL 475
            DKGVSAV Q VS    I PPG++DRVNA L   F  FGY+RVT  FNA+  CDRRRY Y+
Sbjct: 61   DKGVSAVGQCVSLRMVIDPPGVIDRVNAALPEGFEFFGYERVTGGFNAKTMCDRRRYEYV 120

Query: 476  LPVFAIDGKCDVPVHSDILSNSCNVEGKCDASR-FCYGGEVKERFNRILKCYQGTHNFHN 652
            +PV A D +     +SD            DAS  F +   +++R N+IL  Y GTHNFHN
Sbjct: 121  VPVKAFDPRAK---NSD------------DASPPFEFDETMRQRVNKILGNYVGTHNFHN 165

Query: 653  FTTRIKAEDPSSQRFIVSFSANDTVVVDRIEFVKCEVVGQSFMLHQIRKLIGFAVLVMRN 832
            FT R+  ++PS+ R+I+SF  +   VVD + FV+C VVGQSFMLHQIRKLIG  + V+R 
Sbjct: 166  FTVRVSPDEPSAMRYIISFDCSAPFVVDGVAFVRCVVVGQSFMLHQIRKLIGMMLGVIRG 225

Query: 833  FVPESLIEIALRKDVNITVPTAPEVGLYLDECFFTSYNKKWKEIHGDLSMKDYEEAAEDF 1012
               E     AL    ++ VP APE+GL+L EC + +YN ++   H  LS++++ +  E F
Sbjct: 226  AWSEEDQLFALNTKESVNVPMAPELGLFLCECIYHAYNVRYASTHPPLSLENHRDKVETF 285

Query: 1013 KIKHIYSHIALTEHKERVVALWLQSL 1090
            K  HIY H+A TE +E+ +  W++ L
Sbjct: 286  KRVHIYPHMARTETEEQTMENWIRML 311


>GAU22353.1 hypothetical protein TSUD_106820 [Trifolium subterraneum]
          Length = 528

 Score =  288 bits (738), Expect = 3e-88
 Identities = 136/212 (64%), Positives = 168/212 (79%)
 Frame = +2

Query: 569  SRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSANDTVVVDRIEF 748
            S F YG + KERFN+ILK Y GTHNFHNFTTRIK EDPS+ RFI+SF A+ TVVV+ +EF
Sbjct: 317  SGFSYGEKEKERFNKILKSYVGTHNFHNFTTRIKPEDPSAHRFIISFDASTTVVVEGMEF 376

Query: 749  VKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPTAPEVGLYLDEC 928
            VKCE+VGQSFMLHQIRK++G AV +MRN  PESLIE AL+KDV+ITVPTAPEVGLYLDEC
Sbjct: 377  VKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEVGLYLDEC 436

Query: 929  FFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVALWLQSLDHENYR 1108
            FFTSYN+KWK+ H ++SMK YE+ AEDFK+KHIYSHIA TE+K+  V LWL SL+H NY 
Sbjct: 437  FFTSYNQKWKDTHEEVSMKAYEKEAEDFKMKHIYSHIASTEYKDGTVGLWLHSLNHRNYP 496

Query: 1109 ELSAVASSKTKENSEVQITTRENSSEVEIAAD 1204
            +L  +       + + +I T +  +E+E+  +
Sbjct: 497  DLRILDEEGVTNDKKTEIDTNDKKTEIEVVTE 528



 Score =  207 bits (528), Expect = 2e-57
 Identities = 96/136 (70%), Positives = 117/136 (86%)
 Frame = +2

Query: 98  TSPKYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEADLEQALYLSGAIPEQDKDHPKRFDW 277
           T  +YKRRK+AIF  YCGVGYQGMQKN GAKTIE +LE+ALY+SGA+PEQD+   KR+DW
Sbjct: 47  TKIRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDW 106

Query: 278 SRSARTDKGVSAVCQVVSGSFYIHPPGLVDRVNAHLSWQFRVFGYKRVTPSFNAQRFCDR 457
           +RSARTDKGVSAV QVVSG FYI PPG ++R+N++L  Q R+FG+KRVT SF+A++FCDR
Sbjct: 107 ARSARTDKGVSAVGQVVSGRFYIDPPGFIERLNSNLPSQIRIFGFKRVTASFSAKKFCDR 166

Query: 458 RRYVYLLPVFAIDGKC 505
           RRYVYL+PVFA+D  C
Sbjct: 167 RRYVYLIPVFALDPCC 182


>OAY22560.1 hypothetical protein MANES_18G008300 [Manihot esculenta]
          Length = 548

 Score =  289 bits (739), Expect = 3e-88
 Identities = 142/213 (66%), Positives = 164/213 (76%)
 Frame = +2

Query: 569  SRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSANDTVVVDRIEF 748
            S FCYG + KERFNRILK Y G+HNFHNFTTR KAEDPS++R+I+SF A  TV VD IEF
Sbjct: 345  SEFCYGEKEKERFNRILKYYVGSHNFHNFTTRTKAEDPSARRYIISFDAKTTVTVDGIEF 404

Query: 749  VKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPTAPEVGLYLDEC 928
            VKCEVVGQSFMLHQIRK+IG AV ++RN  PESLI  AL+KDV+I VPTAPEVGLYLDEC
Sbjct: 405  VKCEVVGQSFMLHQIRKMIGLAVAIVRNCAPESLISTALQKDVSINVPTAPEVGLYLDEC 464

Query: 929  FFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVALWLQSLDHENYR 1108
             F SYN+KWK+ H +LSMKDYEE AEDFK+KHIYSH+A TEHKE  VALWL SL+H NY 
Sbjct: 465  LFASYNQKWKDSHEELSMKDYEEVAEDFKMKHIYSHVASTEHKEGAVALWLHSLNHRNYP 524

Query: 1109 ELSAVASSKTKENSEVQITTRENSSEVEIAADL 1207
            +L           S    T  E S+EV +A ++
Sbjct: 525  DLRV---------SNCADTNAEKSAEVNLAKEM 548



 Score =  217 bits (553), Expect = 7e-61
 Identities = 108/170 (63%), Positives = 131/170 (77%), Gaps = 9/170 (5%)
 Frame = +2

Query: 56  KMGTPEEPSSKKLKTSP---------KYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEADL 208
           KM T      + + T+P         +YKRRKIAIF  YCGVGYQGMQKN GAKTIE DL
Sbjct: 24  KMSTTTSDDEETVTTAPGDTTTIKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDL 83

Query: 209 EQALYLSGAIPEQDKDHPKRFDWSRSARTDKGVSAVCQVVSGSFYIHPPGLVDRVNAHLS 388
           E+AL+ SGA+PEQD+ + KR+DW+RSARTDKGVSAV QVVSG FYI PPGLV+R+N++LS
Sbjct: 84  EEALFHSGAVPEQDRGNSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNSNLS 143

Query: 389 WQFRVFGYKRVTPSFNAQRFCDRRRYVYLLPVFAIDGKCDVPVHSDILSN 538
            Q R+FGYKRVT SFNA++FCDRRRYVYL+PVFA+D  C  P    +L++
Sbjct: 144 SQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALD-PCSHPDRESVLAS 192


>CBI18897.3 unnamed protein product, partial [Vitis vinifera]
          Length = 419

 Score =  284 bits (727), Expect = 5e-88
 Identities = 136/182 (74%), Positives = 153/182 (84%)
 Frame = +2

Query: 569  SRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSANDTVVVDRIEF 748
            S FCYG + +ERFNRIL  Y GTHNFHNFTTRIKAEDPS+QRFIVSF  N  V V+ IEF
Sbjct: 217  SGFCYGDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEF 276

Query: 749  VKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPTAPEVGLYLDEC 928
            VKCEVVGQSFMLHQIRK+IG AV +MRN  PESL+E AL KDVNI VPTAPEVGLYLDEC
Sbjct: 277  VKCEVVGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDEC 336

Query: 929  FFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVALWLQSLDHENYR 1108
            FF+SYNKKW++ H ++SMK Y E AE+FK+KH+YSHIA TEHKE VVALWL SL+H NY 
Sbjct: 337  FFSSYNKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNYP 396

Query: 1109 EL 1114
            +L
Sbjct: 397  DL 398



 Score =  180 bits (457), Expect = 4e-48
 Identities = 84/110 (76%), Positives = 99/110 (90%)
 Frame = +2

Query: 167 MQKNIGAKTIEADLEQALYLSGAIPEQDKDHPKRFDWSRSARTDKGVSAVCQVVSGSFYI 346
           MQKN GAKTIE DLE+AL+ SGA+PEQD+ HPKRFDW+RSARTDKGVSAV QVVSG FYI
Sbjct: 1   MQKNPGAKTIEGDLEEALFFSGAVPEQDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYI 60

Query: 347 HPPGLVDRVNAHLSWQFRVFGYKRVTPSFNAQRFCDRRRYVYLLPVFAID 496
            PPGLV+R+N++L  Q R+FG+KRVT SFNA++FCDRRRYVYL+PVFA+D
Sbjct: 61  DPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFALD 110


>XP_002307759.2 hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
            EEE94755.2 hypothetical protein POPTR_0005s26830g
            [Populus trichocarpa]
          Length = 497

 Score =  286 bits (732), Expect = 9e-88
 Identities = 143/217 (65%), Positives = 169/217 (77%), Gaps = 3/217 (1%)
 Frame = +2

Query: 536  NSCNVEGKCDASRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSA 715
            N+ + E     S FCYG + KERFNRIL  Y G+HNFHNFTTR KAEDPS+QR+I+SF A
Sbjct: 279  NTKSEEEAIKGSGFCYGEKEKERFNRILNYYLGSHNFHNFTTRTKAEDPSAQRYIISFDA 338

Query: 716  NDTVVVDRIEFVKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPT 895
              TV V+ IEFVKCEVVGQSFMLHQIRK+IG AV +MRN   ESLI+ AL+K+VNI VPT
Sbjct: 339  KTTVAVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCASESLIQTALQKNVNINVPT 398

Query: 896  APEVGLYLDECFFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVAL 1075
            APEVGLYLDECFFTSYN+KWK+ H +LSMKDYEE AE+FK+KHIYSHIA TEHKE  VAL
Sbjct: 399  APEVGLYLDECFFTSYNQKWKDSHEELSMKDYEEEAEEFKMKHIYSHIATTEHKEGSVAL 458

Query: 1076 WLQSLDHENYRELSAVASS---KTKENSEVQITTREN 1177
            WL SL+H NY +L A  +     +++N+  + T  EN
Sbjct: 459  WLHSLNHRNYPDLRACDNGDNITSEDNNGRESTMVEN 495



 Score =  207 bits (527), Expect = 1e-57
 Identities = 102/156 (65%), Positives = 123/156 (78%), Gaps = 9/156 (5%)
 Frame = +2

Query: 56  KMGTPEEPSSKKLKTSP---------KYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEADL 208
           KM T          T+P         +YKRRKIAIF+ YCGVGYQGMQKN GAKTIE DL
Sbjct: 24  KMSTTTSEDEDAATTTPGDDTTIKKQRYKRRKIAIFLTYCGVGYQGMQKNPGAKTIEGDL 83

Query: 209 EQALYLSGAIPEQDKDHPKRFDWSRSARTDKGVSAVCQVVSGSFYIHPPGLVDRVNAHLS 388
           E+AL+ +GA+PE D+  PKR+DW+RSARTDKGVSAV QVVSG FYI PPGLV+R++++LS
Sbjct: 84  EEALFHAGAVPEHDRGIPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLHSNLS 143

Query: 389 WQFRVFGYKRVTPSFNAQRFCDRRRYVYLLPVFAID 496
            Q R+FGYKRVT SFNA++FCDRRRYVYL+PVFA++
Sbjct: 144 PQIRIFGYKRVTGSFNAKKFCDRRRYVYLIPVFALN 179


>XP_006575306.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Glycine max]
          Length = 518

 Score =  286 bits (733), Expect = 1e-87
 Identities = 148/244 (60%), Positives = 182/244 (74%), Gaps = 5/244 (2%)
 Frame = +2

Query: 518  HSDILSNS-CNVEGK-CDASRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQ 691
            +SDIL     N E K  + SRFCYG + +ERFN+ILKC+ GTHNFHNFTTR KAEDP+++
Sbjct: 262  NSDILEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAAR 321

Query: 692  RFIVSFSANDTVVVDRIEFVKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRK 871
            R+I+SF+AN T+VV+ +EFVKCEVVGQSFMLHQIRK+IG AV +MRN  PESLI+ AL++
Sbjct: 322  RYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQ 381

Query: 872  DVNITVPTAPEVGLYLDECFFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTE 1051
            DVNI VPTAPEVGLYLDECFFTSYN+KWK+ H +LSMK YE+ A++FK+K+IYSHIA TE
Sbjct: 382  DVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTE 440

Query: 1052 HKERVVALWLQSLDHENYRELSAV---ASSKTKENSEVQITTRENSSEVEIAADLKSAAG 1222
             KE  VALWL SL+H NY +L  +   A    K     +  T   S++ E A      A 
Sbjct: 441  QKEGTVALWLHSLNHRNYPDLRVINEEAIPNNKSADPKEAITDNKSADPEDATTKNKGAD 500

Query: 1223 LKTA 1234
            LK A
Sbjct: 501  LKEA 504



 Score =  221 bits (563), Expect = 1e-62
 Identities = 103/136 (75%), Positives = 119/136 (87%)
 Frame = +2

Query: 98  TSPKYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEADLEQALYLSGAIPEQDKDHPKRFDW 277
           T  +YKRRK+AIF  YCGVGYQGMQKN GAKTIE DLE+ALY+SGA+PEQD+  PKR+DW
Sbjct: 13  TKKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDW 72

Query: 278 SRSARTDKGVSAVCQVVSGSFYIHPPGLVDRVNAHLSWQFRVFGYKRVTPSFNAQRFCDR 457
           +RSARTDKGVSAV QVVSG FYI PPGLVDR+N++L  Q R+FGYKRVT SFNA++FCDR
Sbjct: 73  ARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDR 132

Query: 458 RRYVYLLPVFAIDGKC 505
           RRYVYL+PVFA+D  C
Sbjct: 133 RRYVYLIPVFALDPSC 148


>XP_003519139.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max] KRH72277.1 hypothetical protein
            GLYMA_02G202300 [Glycine max]
          Length = 548

 Score =  286 bits (733), Expect = 3e-87
 Identities = 148/244 (60%), Positives = 182/244 (74%), Gaps = 5/244 (2%)
 Frame = +2

Query: 518  HSDILSNS-CNVEGK-CDASRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQ 691
            +SDIL     N E K  + SRFCYG + +ERFN+ILKC+ GTHNFHNFTTR KAEDP+++
Sbjct: 292  NSDILEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAAR 351

Query: 692  RFIVSFSANDTVVVDRIEFVKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRK 871
            R+I+SF+AN T+VV+ +EFVKCEVVGQSFMLHQIRK+IG AV +MRN  PESLI+ AL++
Sbjct: 352  RYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQ 411

Query: 872  DVNITVPTAPEVGLYLDECFFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTE 1051
            DVNI VPTAPEVGLYLDECFFTSYN+KWK+ H +LSMK YE+ A++FK+K+IYSHIA TE
Sbjct: 412  DVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTE 470

Query: 1052 HKERVVALWLQSLDHENYRELSAV---ASSKTKENSEVQITTRENSSEVEIAADLKSAAG 1222
             KE  VALWL SL+H NY +L  +   A    K     +  T   S++ E A      A 
Sbjct: 471  QKEGTVALWLHSLNHRNYPDLRVINEEAIPNNKSADPKEAITDNKSADPEDATTKNKGAD 530

Query: 1223 LKTA 1234
            LK A
Sbjct: 531  LKEA 534



 Score =  226 bits (575), Expect = 5e-64
 Identities = 110/157 (70%), Positives = 126/157 (80%), Gaps = 12/157 (7%)
 Frame = +2

Query: 71  EEPSSKKLK------------TSPKYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEADLEQ 214
           EEP  KKLK            T  +YKRRK+AIF  YCGVGYQGMQKN GAKTIE DLE+
Sbjct: 22  EEPEPKKLKMSTTTSDDEETGTKKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEE 81

Query: 215 ALYLSGAIPEQDKDHPKRFDWSRSARTDKGVSAVCQVVSGSFYIHPPGLVDRVNAHLSWQ 394
           ALY+SGA+PEQD+  PKR+DW+RSARTDKGVSAV QVVSG FYI PPGLVDR+N++L  Q
Sbjct: 82  ALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQ 141

Query: 395 FRVFGYKRVTPSFNAQRFCDRRRYVYLLPVFAIDGKC 505
            R+FGYKRVT SFNA++FCDRRRYVYL+PVFA+D  C
Sbjct: 142 IRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSC 178


>XP_011034929.1 PREDICTED: tRNA pseudouridine synthase A, mitochondrial [Populus
            euphratica]
          Length = 534

 Score =  286 bits (731), Expect = 4e-87
 Identities = 143/215 (66%), Positives = 167/215 (77%)
 Frame = +2

Query: 569  SRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQRFIVSFSANDTVVVDRIEF 748
            SRFCYG + KERFNRIL  Y G+HNFHNFTTR KAEDPS++R++VSF A  TV V+ IEF
Sbjct: 321  SRFCYGEKEKERFNRILGYYVGSHNFHNFTTRTKAEDPSARRYMVSFEAKTTVNVEGIEF 380

Query: 749  VKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRKDVNITVPTAPEVGLYLDEC 928
            VKCEVVGQSFMLHQIRK+IG AV +MRN  PESLI+ AL+KDVNI VPTAPEVGLYLDEC
Sbjct: 381  VKCEVVGQSFMLHQIRKMIGVAVAIMRNCAPESLIQTALQKDVNINVPTAPEVGLYLDEC 440

Query: 929  FFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTEHKERVVALWLQSLDHENYR 1108
             FTSYNKKWK+ H ++SMKDYEE AEDFK+KHIYSHIA TEHKE  V+LWL SL+  NY 
Sbjct: 441  LFTSYNKKWKDSHEEISMKDYEEEAEDFKMKHIYSHIATTEHKEGSVSLWLHSLNQRNYP 500

Query: 1109 ELSAVASSKTKENSEVQITTRENSSEVEIAADLKS 1213
            +L    S+   +N+       + S++ E AA   S
Sbjct: 501  DLR--VSNTVDDNTSEDNNNGKESTKFENAAPCTS 533



 Score =  213 bits (543), Expect = 2e-59
 Identities = 101/140 (72%), Positives = 119/140 (85%)
 Frame = +2

Query: 77  PSSKKLKTSPKYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEADLEQALYLSGAIPEQDKD 256
           P         +YKRRKIAIF  YCGVGYQGMQKN GAKTIE DLE+AL+ +GA+PEQD+ 
Sbjct: 40  PGGDTTTKKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEQDRG 99

Query: 257 HPKRFDWSRSARTDKGVSAVCQVVSGSFYIHPPGLVDRVNAHLSWQFRVFGYKRVTPSFN 436
            PKR+DW+RSARTDKGVSAV QVVSG FYI PPGLV+R++++LS QFR+FGYKRVT SFN
Sbjct: 100 IPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLHSNLSPQFRIFGYKRVTGSFN 159

Query: 437 AQRFCDRRRYVYLLPVFAID 496
           A++FCDRRRYVYL+PVFA+D
Sbjct: 160 AKKFCDRRRYVYLIPVFALD 179


>KHN42806.1 tRNA pseudouridine synthase 1 [Glycine soja]
          Length = 552

 Score =  286 bits (732), Expect = 4e-87
 Identities = 148/244 (60%), Positives = 182/244 (74%), Gaps = 5/244 (2%)
 Frame = +2

Query: 518  HSDILSNS-CNVEGK-CDASRFCYGGEVKERFNRILKCYQGTHNFHNFTTRIKAEDPSSQ 691
            +SDIL     N E K  + SRFCYG + +ERFN+ILKC+ GTHNFHNFTTR KAEDP+++
Sbjct: 296  NSDILEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAAR 355

Query: 692  RFIVSFSANDTVVVDRIEFVKCEVVGQSFMLHQIRKLIGFAVLVMRNFVPESLIEIALRK 871
            R+I+SF+AN T+VV+ +EFVKCEVVGQSFMLHQIRK+IG AV +MRN  PESLI+ AL++
Sbjct: 356  RYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQ 415

Query: 872  DVNITVPTAPEVGLYLDECFFTSYNKKWKEIHGDLSMKDYEEAAEDFKIKHIYSHIALTE 1051
            DVNI VPTAPEVGLYLDECFFTSYN+KWK+ H +LSMK YE+ A++FK+K+IYSHIA TE
Sbjct: 416  DVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTE 474

Query: 1052 HKERVVALWLQSLDHENYRELSAV---ASSKTKENSEVQITTRENSSEVEIAADLKSAAG 1222
             KE  VALWL SL+H NY +L  +   A    K     +  T   S++ E A      A 
Sbjct: 475  QKEGTVALWLHSLNHRNYPDLHVINEEAIPNNKSADPKEAITDNKSADPEDATTNNKGAD 534

Query: 1223 LKTA 1234
            LK A
Sbjct: 535  LKEA 538



 Score =  224 bits (571), Expect = 2e-63
 Identities = 110/161 (68%), Positives = 126/161 (78%), Gaps = 16/161 (9%)
 Frame = +2

Query: 71  EEPSSKKLK----------------TSPKYKRRKIAIFVGYCGVGYQGMQKNIGAKTIEA 202
           EEP  KKLK                T  +YKRRK+AIF  YCGVGYQGMQKN GAKTIE 
Sbjct: 22  EEPEPKKLKMSTTTSDDEECIAGTGTKKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEG 81

Query: 203 DLEQALYLSGAIPEQDKDHPKRFDWSRSARTDKGVSAVCQVVSGSFYIHPPGLVDRVNAH 382
           DLE+ALY+SGA+PEQD+  PKR+DW+RSARTDKGVSAV QVVSG FYI PPGLVDR+N++
Sbjct: 82  DLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSN 141

Query: 383 LSWQFRVFGYKRVTPSFNAQRFCDRRRYVYLLPVFAIDGKC 505
           L  Q R+FGYKRVT SFNA++FCDRRRYVYL+PVFA+D  C
Sbjct: 142 LPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSC 182