BLASTX nr result

ID: Angelica23_contig00047160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00047160
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29194.3| unnamed protein product [Vitis vinifera]               99   4e-19
ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19
ref|XP_002867948.1| pentatricopeptide repeat-containing protein ...    79   3e-13
ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containi...    78   8e-13
sp|O49680.2|PP324_ARATH RecName: Full=Pentatricopeptide repeat-c...    74   2e-11

>emb|CBI29194.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/81 (56%), Positives = 57/81 (70%)
 Frame = -3

Query: 243 CFSLVDRFYAMMDTACWNAVIVGCTQNGYYSYSLRTFNLMRRKSQVFHDSITLVSVISAC 64
           CFSL+    A  D  CWN V+ GCTQNG++  +L+ FNLMR+   V HDS+ L +VISAC
Sbjct: 452 CFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISAC 511

Query: 63  GNLELLLEGQWCHGLAVKTLV 1
           GNLELL  G   HGLA+KTL+
Sbjct: 512 GNLELLFAGGSLHGLALKTLM 532


>ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial [Vitis vinifera]
          Length = 828

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/81 (56%), Positives = 57/81 (70%)
 Frame = -3

Query: 243 CFSLVDRFYAMMDTACWNAVIVGCTQNGYYSYSLRTFNLMRRKSQVFHDSITLVSVISAC 64
           CFSL+    A  D  CWN V+ GCTQNG++  +L+ FNLMR+   V HDS+ L +VISAC
Sbjct: 433 CFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISAC 492

Query: 63  GNLELLLEGQWCHGLAVKTLV 1
           GNLELL  G   HGLA+KTL+
Sbjct: 493 GNLELLFAGGSLHGLALKTLM 513


>ref|XP_002867948.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313784|gb|EFH44207.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 919

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/81 (44%), Positives = 53/81 (65%)
 Frame = -3

Query: 246 TCFSLVDRFYAMMDTACWNAVIVGCTQNGYYSYSLRTFNLMRRKSQVFHDSITLVSVISA 67
           + F L++  +   D   WN+VI GC  +G++  SLR F  M R+ ++ HD ITL+  ISA
Sbjct: 521 SAFLLLEMIFETRDLTSWNSVIYGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISA 580

Query: 66  CGNLELLLEGQWCHGLAVKTL 4
            GNL L+L+G+  HGLA+K+L
Sbjct: 581 SGNLRLVLQGRCLHGLAIKSL 601


>ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial-like [Glycine max]
          Length = 944

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 38/78 (48%), Positives = 53/78 (67%)
 Frame = -3

Query: 240 FSLVDRFYAMMDTACWNAVIVGCTQNGYYSYSLRTFNLMRRKSQVFHDSITLVSVISACG 61
           FS++    A+ D A WN +IVGC +  ++  +L TFNLMR++  + +DSITLVS +SAC 
Sbjct: 554 FSILHENSALADIASWNTLIVGCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACA 613

Query: 60  NLELLLEGQWCHGLAVKT 7
           NLEL   G+  HGL VK+
Sbjct: 614 NLELFNLGKSLHGLTVKS 631


>sp|O49680.2|PP324_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19220, mitochondrial; Flags: Precursor
          Length = 951

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/68 (50%), Positives = 47/68 (69%)
 Frame = -3

Query: 207 DTACWNAVIVGCTQNGYYSYSLRTFNLMRRKSQVFHDSITLVSVISACGNLELLLEGQWC 28
           D   WN+VI GC  +G++  SLR F  M R+ ++ HD ITL+  ISA GNL L+L+G+  
Sbjct: 563 DLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCF 622

Query: 27  HGLAVKTL 4
           HGLA+K+L
Sbjct: 623 HGLAIKSL 630


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