BLASTX nr result

ID: Angelica23_contig00047158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00047158
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
emb|CBI16090.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002520529.1| pentatricopeptide repeat-containing protein,...    67   1e-09
ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    67   2e-09
ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09

>ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 628

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = -2

Query: 303 CPYDDATYVLVSNVMATGGYWDNAAELRKLMYNRGVKKQPAHSWI 169
           CP D   YVL+SNV AT GYWDN A +RK+M +RGV+K+P +SWI
Sbjct: 584 CPNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKEPGYSWI 628


>emb|CBI16090.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = -2

Query: 303 CPYDDATYVLVSNVMATGGYWDNAAELRKLMYNRGVKKQPAHSWI 169
           CP D   YVL+SNV AT GYWDN A +RK+M +RGV+K+P +SWI
Sbjct: 414 CPNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKEPGYSWI 458


>ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540371|gb|EEF41942.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/44 (63%), Positives = 38/44 (86%)
 Frame = -2

Query: 300 PYDDATYVLVSNVMATGGYWDNAAELRKLMYNRGVKKQPAHSWI 169
           P D ATY+L+SN++AT GYWD+AA++RKLM +RGV+K P +SWI
Sbjct: 563 PDDPATYILLSNMLATEGYWDDAADVRKLMCDRGVRKNPGYSWI 606


>ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11290-like [Cucumis sativus]
          Length = 616

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = -2

Query: 300 PYDDATYVLVSNVMATGGYWDNAAELRKLMYNRGVKKQPAHSWI 169
           PYD ATY+++SN +   GYWD+AA +R+LM NRGVKK+P  SW+
Sbjct: 573 PYDPATYIMLSNALGRDGYWDDAASIRRLMSNRGVKKEPGFSWM 616


>ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 616

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = -2

Query: 300 PYDDATYVLVSNVMATGGYWDNAAELRKLMYNRGVKKQPAHSWI 169
           PYD ATY+++SN +   GYWD+AA +R+LM NRGVKK+P  SW+
Sbjct: 573 PYDPATYIMLSNALGRDGYWDDAASIRRLMSNRGVKKEPGFSWM 616


Top