BLASTX nr result

ID: Angelica23_contig00047140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00047140
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272313.1| PREDICTED: F-box protein At2g27310-like [Vit...    49   2e-07
emb|CAN62852.1| hypothetical protein VITISV_010156 [Vitis vinifera]    49   2e-07
emb|CBI32366.3| unnamed protein product [Vitis vinifera]               47   8e-07
ref|XP_002520762.1| hypothetical protein RCOM_0558700 [Ricinus c...    47   1e-06
ref|XP_002306768.1| predicted protein [Populus trichocarpa] gi|2...    47   6e-06

>ref|XP_002272313.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 379

 Score = 48.9 bits (115), Expect(2) = 2e-07
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 175 DMDKFKNVSPSDFVSIVDTRYKDTTIYSKEL 267
           DMD F+++SPSDFVSIVD RYKD TI SK L
Sbjct: 120 DMDDFESISPSDFVSIVDIRYKDKTICSKVL 150



 Score = 31.2 bits (69), Expect(2) = 2e-07
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 264 ITNANG*NS*FSNCPFRNDL 323
           I NANG N  F NCPFR DL
Sbjct: 153 IPNANGFNGWFDNCPFRIDL 172


>emb|CAN62852.1| hypothetical protein VITISV_010156 [Vitis vinifera]
          Length = 365

 Score = 48.9 bits (115), Expect(2) = 2e-07
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 175 DMDKFKNVSPSDFVSIVDTRYKDTTIYSKEL 267
           DMD F+++SPSDFVSIVD RYKD TI SK L
Sbjct: 106 DMDDFESISPSDFVSIVDIRYKDKTICSKVL 136



 Score = 31.2 bits (69), Expect(2) = 2e-07
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 264 ITNANG*NS*FSNCPFRNDL 323
           I NANG N  F NCPFR DL
Sbjct: 139 IPNANGFNGWFDNCPFRIDL 158


>emb|CBI32366.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score = 46.6 bits (109), Expect(2) = 8e-07
 Identities = 22/30 (73%), Positives = 25/30 (83%)
 Frame = +1

Query: 178 MDKFKNVSPSDFVSIVDTRYKDTTIYSKEL 267
           MD F+++SPSDFVSIVD RYKD TI SK L
Sbjct: 1   MDDFESISPSDFVSIVDIRYKDKTICSKVL 30



 Score = 31.2 bits (69), Expect(2) = 8e-07
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 264 ITNANG*NS*FSNCPFRNDL 323
           I NANG N  F NCPFR DL
Sbjct: 33  IPNANGFNGWFDNCPFRIDL 52


>ref|XP_002520762.1| hypothetical protein RCOM_0558700 [Ricinus communis]
           gi|223540147|gb|EEF41724.1| hypothetical protein
           RCOM_0558700 [Ricinus communis]
          Length = 373

 Score = 46.6 bits (109), Expect(2) = 1e-06
 Identities = 20/31 (64%), Positives = 27/31 (87%)
 Frame = +1

Query: 175 DMDKFKNVSPSDFVSIVDTRYKDTTIYSKEL 267
           D+D+F++++PSDFVSIVD RYKD T+ SK L
Sbjct: 114 DIDEFESIAPSDFVSIVDIRYKDKTVCSKVL 144



 Score = 30.4 bits (67), Expect(2) = 1e-06
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 264 ITNANG*NS*FSNCPFRNDL 323
           I NANG N  F NCPFR DL
Sbjct: 147 IPNANGFNGWFYNCPFRIDL 166


>ref|XP_002306768.1| predicted protein [Populus trichocarpa] gi|222856217|gb|EEE93764.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score = 47.4 bits (111), Expect(2) = 6e-06
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = +1

Query: 175 DMDKFKNVSPSDFVSIVDTRYKDTTIYSKEL 267
           D+D+F++V+PSDFVSIVD RYKD TI SK L
Sbjct: 116 DVDEFESVAPSDFVSIVDIRYKDKTICSKVL 146



 Score = 27.3 bits (59), Expect(2) = 6e-06
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = +3

Query: 264 ITNANG*NS*FSNCPFRNDL 323
           I NAN  N  F NCPFR DL
Sbjct: 149 IPNANEFNGWFYNCPFRIDL 168


Top