BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00047106
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             134   8e-30
gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   133   1e-29
gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsi...   129   2e-28
emb|CAN65400.1| hypothetical protein VITISV_005674 [Vitis vinifera]   128   6e-28
dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]                   127   7e-28

>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  134 bits (337), Expect = 8e-30
 Identities = 64/97 (65%), Positives = 80/97 (82%)
 Frame = -1

Query: 297 GLKNAGATYQRLVNKIFAHLIGKTMEVYVDDMLVKSLEKADHIKHLREAFEVLRHHKMML 118
           GLKNAGATYQRLVNK+F + +GKTMEVY+DDMLVKSL+K DH+KHL E F +L  ++M L
Sbjct: 147 GLKNAGATYQRLVNKMFHNHLGKTMEVYIDDMLVKSLKKEDHVKHLEECFGILNKYQMKL 206

Query: 117 NPSKCAFGVGSGNFLGLMVSK*GIEANLDKIKAILDM 7
           NP+KC FGV SG FLG +V++ GIEAN ++I A L+M
Sbjct: 207 NPAKCTFGVPSGEFLGYIVTERGIEANSNQINAFLNM 243


>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/97 (63%), Positives = 79/97 (81%)
 Frame = -1

Query: 297 GLKNAGATYQRLVNKIFAHLIGKTMEVYVDDMLVKSLEKADHIKHLREAFEVLRHHKMML 118
           GL+NAGATY RLVNK+F+  +GKTMEVY+DDML+KSL+K DH+KHL E F +L  ++M L
Sbjct: 590 GLRNAGATYPRLVNKMFSEHVGKTMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMKL 649

Query: 117 NPSKCAFGVGSGNFLGLMVSK*GIEANLDKIKAILDM 7
           NP+KC FGV SG FLG +V+K GIEAN ++I A L+M
Sbjct: 650 NPAKCTFGVPSGEFLGYIVTKRGIEANPNQINAFLNM 686


>gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 764

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/98 (64%), Positives = 76/98 (77%)
 Frame = -1

Query: 297 GLKNAGATYQRLVNKIFAHLIGKTMEVYVDDMLVKSLEKADHIKHLREAFEVLRHHKMML 118
           GLKN GA YQRLVN++FA  +GKTMEVY+DDMLVKS   ADHI HL+  FE L  + M L
Sbjct: 623 GLKNVGARYQRLVNQMFAPQLGKTMEVYIDDMLVKSTRSADHIDHLKACFETLNKYNMKL 682

Query: 117 NPSKCAFGVGSGNFLGLMVSK*GIEANLDKIKAILDME 4
           NP+KC FGV SG FLG +V+K GIEAN  +I+AILD++
Sbjct: 683 NPAKCLFGVTSGEFLGYIVTKRGIEANPKQIRAILDLQ 720


>emb|CAN65400.1| hypothetical protein VITISV_005674 [Vitis vinifera]
          Length = 965

 Score =  128 bits (321), Expect = 6e-28
 Identities = 60/99 (60%), Positives = 78/99 (78%)
 Frame = -1

Query: 297 GLKNAGATYQRLVNKIFAHLIGKTMEVYVDDMLVKSLEKADHIKHLREAFEVLRHHKMML 118
           GLKNAGATYQRL+ KIF  LIG T+EVY+DD++VKS  + +H+ HL+E F +LR + M L
Sbjct: 147 GLKNAGATYQRLMTKIFKPLIGHTVEVYIDDIVVKSKTREEHVLHLQEVFHLLREYDMKL 206

Query: 117 NPSKCAFGVGSGNFLGLMVSK*GIEANLDKIKAILDMEP 1
           NPSKCAFGV +G FLG MVS+ GIE + D+IKA+++  P
Sbjct: 207 NPSKCAFGVSAGKFLGFMVSQRGIEVSPDQIKAVMETHP 245


>dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
          Length = 1542

 Score =  127 bits (320), Expect = 7e-28
 Identities = 62/98 (63%), Positives = 75/98 (76%)
 Frame = -1

Query: 297  GLKNAGATYQRLVNKIFAHLIGKTMEVYVDDMLVKSLEKADHIKHLREAFEVLRHHKMML 118
            GLKN GATYQRLVNKIF  LIG TMEVYVDDM+ KS +  DH+KHL E FE+LR ++M L
Sbjct: 905  GLKNTGATYQRLVNKIFKPLIGHTMEVYVDDMITKSKKPKDHVKHLEETFELLRKYEMKL 964

Query: 117  NPSKCAFGVGSGNFLGLMVSK*GIEANLDKIKAILDME 4
            NP KCAFGV SG FLG +VS   I+ N  KI+A+ +++
Sbjct: 965  NPEKCAFGVSSGKFLGFLVSHRRIKVNPAKIRAVTEIK 1002