BLASTX nr result

ID: Angelica23_contig00047056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00047056
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|2...   211   5e-53
ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative...   210   9e-53
emb|CBI28088.3| unnamed protein product [Vitis vinifera]              205   4e-51
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...   205   4e-51
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]   205   4e-51

>ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|222873240|gb|EEF10371.1|
           predicted protein [Populus trichocarpa]
          Length = 1107

 Score =  211 bits (537), Expect = 5e-53
 Identities = 98/115 (85%), Positives = 113/115 (98%)
 Frame = -1

Query: 346 LYIPPDALRNMSASQKQYWTLKSQYMDVLMFFKVGKFYELYELDAEVGHKELDWKITLSG 167
           LY+PPDAL+ MSASQKQYWT+KSQYMDVL+FFKVGKFYELYELDAE+GHKELDWK+TLSG
Sbjct: 255 LYLPPDALKKMSASQKQYWTVKSQYMDVLLFFKVGKFYELYELDAEIGHKELDWKMTLSG 314

Query: 166 VGKCRQVGISENGIDDAVQKLIARGYKVGKIEQVETSEQAKARGAASIIQRKLVQ 2
           VGKCRQVGISE+GIDDAV+KL+ARGYKVG++EQ+ETS+QAK+RGA S+IQRKLVQ
Sbjct: 315 VGKCRQVGISESGIDDAVEKLVARGYKVGRVEQLETSDQAKSRGANSVIQRKLVQ 369


>ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
           gi|223546788|gb|EEF48286.1| DNA mismatch repair protein
           MSH6-2, putative [Ricinus communis]
          Length = 1089

 Score =  210 bits (535), Expect = 9e-53
 Identities = 101/115 (87%), Positives = 112/115 (97%)
 Frame = -1

Query: 346 LYIPPDALRNMSASQKQYWTLKSQYMDVLMFFKVGKFYELYELDAEVGHKELDWKITLSG 167
           LYIPPDALR MSASQKQYW++KSQYMDV++FFKVGKFYELYELDAE+GHKELDWKITLSG
Sbjct: 243 LYIPPDALRIMSASQKQYWSVKSQYMDVVLFFKVGKFYELYELDAEIGHKELDWKITLSG 302

Query: 166 VGKCRQVGISENGIDDAVQKLIARGYKVGKIEQVETSEQAKARGAASIIQRKLVQ 2
           VGKCRQVGISE+GIDDAV+KL+ARGYKVG+IEQ+ETS QAKARGA S+IQRKLVQ
Sbjct: 303 VGKCRQVGISESGIDDAVEKLVARGYKVGRIEQLETSVQAKARGANSVIQRKLVQ 357


>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  205 bits (521), Expect = 4e-51
 Identities = 96/114 (84%), Positives = 110/114 (96%)
 Frame = -1

Query: 346 LYIPPDALRNMSASQKQYWTLKSQYMDVLMFFKVGKFYELYELDAEVGHKELDWKITLSG 167
           LYIPPDAL+ MSASQKQYW++K QYMDV++FFKVGKFYELYELDAE+GHKELDWK+T SG
Sbjct: 267 LYIPPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSG 326

Query: 166 VGKCRQVGISENGIDDAVQKLIARGYKVGKIEQVETSEQAKARGAASIIQRKLV 5
           VGKCRQVGISE+GID+AVQKLIARGYKVG++EQ+ETSEQAKARG+ S+IQRKLV
Sbjct: 327 VGKCRQVGISESGIDEAVQKLIARGYKVGRMEQLETSEQAKARGSTSVIQRKLV 380


>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score =  205 bits (521), Expect = 4e-51
 Identities = 96/114 (84%), Positives = 110/114 (96%)
 Frame = -1

Query: 346 LYIPPDALRNMSASQKQYWTLKSQYMDVLMFFKVGKFYELYELDAEVGHKELDWKITLSG 167
           LYIPPDAL+ MSASQKQYW++K QYMDV++FFKVGKFYELYELDAE+GHKELDWK+T SG
Sbjct: 265 LYIPPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSG 324

Query: 166 VGKCRQVGISENGIDDAVQKLIARGYKVGKIEQVETSEQAKARGAASIIQRKLV 5
           VGKCRQVGISE+GID+AVQKLIARGYKVG++EQ+ETSEQAKARG+ S+IQRKLV
Sbjct: 325 VGKCRQVGISESGIDEAVQKLIARGYKVGRMEQLETSEQAKARGSTSVIQRKLV 378


>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
          Length = 1090

 Score =  205 bits (521), Expect = 4e-51
 Identities = 96/114 (84%), Positives = 110/114 (96%)
 Frame = -1

Query: 346 LYIPPDALRNMSASQKQYWTLKSQYMDVLMFFKVGKFYELYELDAEVGHKELDWKITLSG 167
           LYIPPDAL+ MSASQKQYW++K QYMDV++FFKVGKFYELYELDAE+GHKELDWK+T SG
Sbjct: 265 LYIPPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSG 324

Query: 166 VGKCRQVGISENGIDDAVQKLIARGYKVGKIEQVETSEQAKARGAASIIQRKLV 5
           VGKCRQVGISE+GID+AVQKLIARGYKVG++EQ+ETSEQAKARG+ S+IQRKLV
Sbjct: 325 VGKCRQVGISESGIDEAVQKLIARGYKVGRMEQLETSEQAKARGSTSVIQRKLV 378


Top