BLASTX nr result

ID: Angelica23_contig00047052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00047052
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containi...   113   1e-23
emb|CBI16090.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    96   4e-18
ref|XP_002520529.1| pentatricopeptide repeat-containing protein,...    95   5e-18

>ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 628

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/93 (61%), Positives = 69/93 (74%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   QMPDEAMILVRDMLRWGVGANFLTYNCLLSSFSFPEDFNHFKQVHGRIIQEGLESNHYLS 182
           Q P  AM+LVRDM R G+  N++TYNCLLSSFS   D +H KQVH RII+EGLESN YL 
Sbjct: 260 QQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLE 319

Query: 183 VSLMTVYSE--SGNAANFLRICSTVIIWDQISW 275
           V+L+TVYSE  S +  +F ++CS V  WDQISW
Sbjct: 320 VTLVTVYSECSSSSLEDFNKVCSGVTRWDQISW 352


>emb|CBI16090.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/93 (61%), Positives = 69/93 (74%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   QMPDEAMILVRDMLRWGVGANFLTYNCLLSSFSFPEDFNHFKQVHGRIIQEGLESNHYLS 182
           Q P  AM+LVRDM R G+  N++TYNCLLSSFS   D +H KQVH RII+EGLESN YL 
Sbjct: 90  QQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLE 149

Query: 183 VSLMTVYSE--SGNAANFLRICSTVIIWDQISW 275
           V+L+TVYSE  S +  +F ++CS V  WDQISW
Sbjct: 150 VTLVTVYSECSSSSLEDFNKVCSGVTRWDQISW 182


>ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 616

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/92 (52%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   QMPDEAMILVRDMLRWGVGANFLTYNCLLSSFSFPEDFNHFKQVHGRIIQEGLESNHYLS 182
           Q+P EAMIL+R+ML   +  N +TYN LLSSFS P  F+  KQ+H RII EG ESN+Y++
Sbjct: 249 QLPHEAMILMREMLHLNLKPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIA 308

Query: 183 VSLMTVYSE-SGNAANFLRICSTVIIWDQISW 275
           V+L+T YSE  G+  ++ ++CS + + DQISW
Sbjct: 309 VTLVTAYSECCGSLEDYRKVCSNIRMSDQISW 340


>ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11290-like [Cucumis sativus]
          Length = 616

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/92 (51%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   QMPDEAMILVRDMLRWGVGANFLTYNCLLSSFSFPEDFNHFKQVHGRIIQEGLESNHYLS 182
           Q+P EAM L+R+ML   +  N +TYN LLSSFS P  F+  KQ+H RII EG ESN+Y++
Sbjct: 249 QLPHEAMXLMREMLHLNLEPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIA 308

Query: 183 VSLMTVYSE-SGNAANFLRICSTVIIWDQISW 275
           V+L+T YSE  G+  ++ ++CS + + DQISW
Sbjct: 309 VTLVTAYSECCGSLEDYRKVCSNIRMSDQISW 340


>ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540371|gb|EEF41942.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 50/92 (54%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   QMPDEAMILVRDMLRWGVGANFLTYNCLLSSFSFPEDFNHFKQVHGRIIQEGLESNHYLS 182
           + PDEAMILVR+M+R G+ AN++TYN LLSSFS P+   + KQVH  II+ GLE N Y++
Sbjct: 239 EQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYIA 298

Query: 183 VSLMTVYSE-SGNAANFLRICSTVIIWDQISW 275
            +L+TVYS+ + N  +F +I S V + DQISW
Sbjct: 299 ATLVTVYSKCTNNLEDFNKISSGVQLSDQISW 330


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