BLASTX nr result

ID: Angelica23_contig00047034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00047034
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315826.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat...   182   2e-44
gb|ADQ43199.1| unknown [Eutrema parvulum]                             181   7e-44
ref|XP_002518803.1| pentatricopeptide repeat-containing protein,...   180   9e-44
ref|NP_178323.3| tetratricopeptide repeat-containing protein [Ar...   179   3e-43

>ref|XP_002315826.1| predicted protein [Populus trichocarpa] gi|222864866|gb|EEF01997.1|
           predicted protein [Populus trichocarpa]
          Length = 636

 Score =  183 bits (464), Expect = 1e-44
 Identities = 83/131 (63%), Positives = 110/131 (83%)
 Frame = +2

Query: 2   FSHSTESFCIVIHILFCSLMYVDAHDMVRDLVSSNRVVPASDFFDMLWSTRNVCAPGFGV 181
           F H+TES+CI++HILF + MY  A++++++LV S+ V+P SD F++LW+TRNVC PGFGV
Sbjct: 5   FRHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEILWTTRNVCVPGFGV 64

Query: 182 FDTLFSVLVELGKFEEATECFSKMKRFKVLPKARSCNSLLHRLTKSGKGNDSKTFFRDMV 361
           FD LFSVLVELG  E A +CF +M +F+VLPKARSCN+ LHRL+K+G+G+ S+ FFRDMV
Sbjct: 65  FDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMV 124

Query: 362 GAGITPSVFTY 394
           GAGI P+VFTY
Sbjct: 125 GAGIAPTVFTY 135


>ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  182 bits (463), Expect = 2e-44
 Identities = 81/131 (61%), Positives = 103/131 (78%)
 Frame = +2

Query: 2   FSHSTESFCIVIHILFCSLMYVDAHDMVRDLVSSNRVVPASDFFDMLWSTRNVCAPGFGV 181
           F H+ ES+C++ HILFC + Y+DA  ++++ +   R  P  DFFDMLWSTRNVC PGFGV
Sbjct: 124 FRHAAESYCVLAHILFCGMFYLDARSVIKEWILLGREFPGCDFFDMLWSTRNVCRPGFGV 183

Query: 182 FDTLFSVLVELGKFEEATECFSKMKRFKVLPKARSCNSLLHRLTKSGKGNDSKTFFRDMV 361
           FDTLF+VLV+LG  EEA +CF KM +F+VLPK RSCN LLHRL+KS KG  + +FF+DMV
Sbjct: 184 FDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMV 243

Query: 362 GAGITPSVFTY 394
            AG++PSVFTY
Sbjct: 244 VAGLSPSVFTY 254


>gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/131 (62%), Positives = 101/131 (77%)
 Frame = +2

Query: 2   FSHSTESFCIVIHILFCSLMYVDAHDMVRDLVSSNRVVPASDFFDMLWSTRNVCAPGFGV 181
           F+H+ ES+CIV HILFC+ MY DA+ ++R++V S   +   D FD LWSTRNVC PGFGV
Sbjct: 6   FNHTIESYCIVAHILFCARMYYDANSILREIVLSKAELEECDVFDELWSTRNVCVPGFGV 65

Query: 182 FDTLFSVLVELGKFEEATECFSKMKRFKVLPKARSCNSLLHRLTKSGKGNDSKTFFRDMV 361
           FD LFSVL++LG  EEAT+CFSKMKRF+V PK RSCN LLH+  K GK +  K FF+DM+
Sbjct: 66  FDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI 125

Query: 362 GAGITPSVFTY 394
           GAG  P+VFTY
Sbjct: 126 GAGSKPTVFTY 136


>ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542184|gb|EEF43728.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 775

 Score =  180 bits (457), Expect = 9e-44
 Identities = 82/131 (62%), Positives = 105/131 (80%)
 Frame = +2

Query: 2   FSHSTESFCIVIHILFCSLMYVDAHDMVRDLVSSNRVVPASDFFDMLWSTRNVCAPGFGV 181
           F  +TES+C+++HILF + MY DA+  +++L+SS R++P  D F++LWSTRNVC PGFGV
Sbjct: 125 FCLTTESYCLLVHILFYARMYFDANFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGV 184

Query: 182 FDTLFSVLVELGKFEEATECFSKMKRFKVLPKARSCNSLLHRLTKSGKGNDSKTFFRDMV 361
           FD LFSV +ELG  EEA +CFS+M RF+V PKARSCN+ L+RL K+GKG+ S  FFRDMV
Sbjct: 185 FDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMV 244

Query: 362 GAGITPSVFTY 394
           GAGI  SVFTY
Sbjct: 245 GAGIAQSVFTY 255


>ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546751|sp|P0C894.1|PP143_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At2g02150 gi|330250459|gb|AEC05553.1|
           tetratricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 761

 Score =  179 bits (453), Expect = 3e-43
 Identities = 83/131 (63%), Positives = 100/131 (76%)
 Frame = +2

Query: 2   FSHSTESFCIVIHILFCSLMYVDAHDMVRDLVSSNRVVPASDFFDMLWSTRNVCAPGFGV 181
           F HS ES+CIV HILFC+ MY DA+ +++++V S       D FD+LWSTRNVC PGFGV
Sbjct: 138 FKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKA---DCDVFDVLWSTRNVCVPGFGV 194

Query: 182 FDTLFSVLVELGKFEEATECFSKMKRFKVLPKARSCNSLLHRLTKSGKGNDSKTFFRDMV 361
           FD LFSVL++LG  EEA +CFSKMKRF+V PK RSCN LLHR  K GK +D K FF+DM+
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254

Query: 362 GAGITPSVFTY 394
           GAG  P+VFTY
Sbjct: 255 GAGARPTVFTY 265


Top