BLASTX nr result

ID: Angelica23_contig00047008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00047008
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU04618.1| CENP-C [Solanum tuberosum]                              78   9e-13
emb|CBI36186.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002280442.2| PREDICTED: uncharacterized protein LOC100244...    64   1e-08
dbj|BAI48085.1| centromere protein C [Nicotiana tomentosiformis]       55   6e-06
dbj|BAI48084.1| centromere protein C homologue [Nicotiana tabacum]     55   6e-06

>gb|AAU04618.1| CENP-C [Solanum tuberosum]
          Length = 384

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 45/100 (45%), Positives = 60/100 (60%)
 Frame = -2

Query: 302 PSATSCSRQPGILGFRKSVSNVQHYSSAVSENDDTFLSFQEAIQDDSLCPSKFVSHQETA 123
           P A +  R+PGILG  KSV     +SS   ENDD F+S QE ++DD L        +E  
Sbjct: 172 PPANARRRRPGILG--KSVKYKHRFSSTQPENDDAFISSQETLEDDILVEHGSQLPEELH 229

Query: 122 HFDIDLHGKELAESISKTENRINELLDKLLSESIGNLDAD 3
             +++L   EL  S+ KTENRIN++LD+LLS S  +LD D
Sbjct: 230 GLNVELQEAELTGSVKKTENRINKILDELLSGSDEDLDRD 269


>emb|CBI36186.3| unnamed protein product [Vitis vinifera]
          Length = 899

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/99 (38%), Positives = 61/99 (61%)
 Frame = -2

Query: 299 SATSCSRQPGILGFRKSVSNVQHYSSAVSENDDTFLSFQEAIQDDSLCPSKFVSHQETAH 120
           S T+  R+PGILG  +SVS   HYSS VS+ND+  +     ++   + PS + S  E   
Sbjct: 173 STTARHRRPGILG--RSVSYKHHYSSLVSDNDENLMPSPATVEQMIVSPSNYSSQVEMVD 230

Query: 119 FDIDLHGKELAESISKTENRINELLDKLLSESIGNLDAD 3
            ++ L  +EL  S+++ EN+++E+LD+LLS +  +LD D
Sbjct: 231 PNVALQERELTVSVTQAENKVDEILDELLSGNCEDLDGD 269


>ref|XP_002280442.2| PREDICTED: uncharacterized protein LOC100244530 [Vitis vinifera]
          Length = 949

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 15/114 (13%)
 Frame = -2

Query: 299 SATSCSRQPGILGFRKSVSNVQHYSSAVSENDDTFLSFQEAIQDDSLCPSKFVSHQETAH 120
           S T+  R+PGILG  +SVS   HYSS VS+ND+  +     ++   + PS + S  E   
Sbjct: 196 STTARHRRPGILG--RSVSYKHHYSSLVSDNDENLMPSPATVEQMIVSPSNYSSQVEMVD 253

Query: 119 FDIDLHGKELAE---------------SISKTENRINELLDKLLSESIGNLDAD 3
            ++ L  +EL E               S+++ EN+++E+LD+LLS +  +LD D
Sbjct: 254 PNVALQERELTETVDPSVESLERELTVSVTQAENKVDEILDELLSGNCEDLDGD 307


>dbj|BAI48085.1| centromere protein C [Nicotiana tomentosiformis]
          Length = 714

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/98 (36%), Positives = 53/98 (54%)
 Frame = -2

Query: 302 PSATSCSRQPGILGFRKSVSNVQHYSSAVSENDDTFLSFQEAIQDDSLCPSKFVSHQETA 123
           P A +  R+PGIL   KSV     +SS  SENDD F+S QE +  D          +E  
Sbjct: 166 PPANARRRRPGILN--KSVRYKHRFSSIESENDDAFISSQETLGSDIRAGQNSQLPEEPP 223

Query: 122 HFDIDLHGKELAESISKTENRINELLDKLLSESIGNLD 9
             +++L   +   S+ KTEN  N +L++LLS + G+L+
Sbjct: 224 GLNVELQEADSPGSVEKTEN--NGILNELLSSNGGDLN 259


>dbj|BAI48084.1| centromere protein C homologue [Nicotiana tabacum]
          Length = 714

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/98 (36%), Positives = 53/98 (54%)
 Frame = -2

Query: 302 PSATSCSRQPGILGFRKSVSNVQHYSSAVSENDDTFLSFQEAIQDDSLCPSKFVSHQETA 123
           P A +  R+PGIL   KSV     +SS  SENDD F+S QE +  D          +E  
Sbjct: 166 PPANARRRRPGILN--KSVRYKHRFSSIESENDDAFISSQETLGSDIRAGQNSQLPEEPP 223

Query: 122 HFDIDLHGKELAESISKTENRINELLDKLLSESIGNLD 9
             +++L   +   S+ KTEN  N +L++LLS + G+L+
Sbjct: 224 GLNVELQEADSPGSVEKTEN--NGILNELLSSNGGDLN 259


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