BLASTX nr result

ID: Angelica23_contig00046984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00046984
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL79762.1|AC096687_26 putative polyprotein [Oryza sativa Jap...    97   1e-18
gb|AAK82434.1|AC091247_1 putative polyprotein, 5'-partial [Oryza...    97   1e-18
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...    96   3e-18
emb|CAJ00278.1| hypothetical protein [Lotus japonicus]                 94   9e-18
emb|CAJ00277.1| hypothetical protein [Lotus japonicus]                 94   9e-18

>gb|AAL79762.1|AC096687_26 putative polyprotein [Oryza sativa Japonica Group]
            gi|108711868|gb|ABF99663.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1087

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/77 (57%), Positives = 57/77 (74%)
 Frame = +2

Query: 38   SSVKATYQKIKTLFYWHDLKKSVATHVKHCMVCQRCKYDNQAYLGLLQPLPVPNEVWEAI 217
            S V+ATYQ++K LF W  LKKSV   V+ C +CQR K++N AY GLLQPLP+P+  W+ +
Sbjct: 989  SGVQATYQRVKKLFVWVGLKKSVTDFVQQCDICQRAKHENCAYPGLLQPLPIPSGAWQVV 1048

Query: 218  TMDFIEELPKSQGKEVI 268
             MDFIE LP S+G +VI
Sbjct: 1049 LMDFIEGLPVSKGFDVI 1065


>gb|AAK82434.1|AC091247_1 putative polyprotein, 5'-partial [Oryza sativa Japonica Group]
          Length = 799

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/77 (57%), Positives = 57/77 (74%)
 Frame = +2

Query: 38  SSVKATYQKIKTLFYWHDLKKSVATHVKHCMVCQRCKYDNQAYLGLLQPLPVPNEVWEAI 217
           S V+ATYQ++K LF W  LKKSV   V+ C +CQR K++N AY GLLQPLP+P+  W+ +
Sbjct: 701 SGVQATYQRVKKLFVWVGLKKSVTDFVQQCDICQRAKHENCAYPGLLQPLPIPSGAWQVV 760

Query: 218 TMDFIEELPKSQGKEVI 268
            MDFIE LP S+G +VI
Sbjct: 761 LMDFIEGLPVSKGFDVI 777


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 43/74 (58%), Positives = 55/74 (74%)
 Frame = +2

Query: 50   ATYQKIKTLFYWHDLKKSVATHVKHCMVCQRCKYDNQAYLGLLQPLPVPNEVWEAITMDF 229
            ATYQ++K LFYW  +KK + T V+ C VCQR K ++  Y GLL+PLP+P+  W  I+MDF
Sbjct: 936  ATYQRVKHLFYWPGMKKEIHTMVRECAVCQRSKAEHCHYPGLLEPLPIPDMAWTHISMDF 995

Query: 230  IEELPKSQGKEVIF 271
            IE LP S+GKEVIF
Sbjct: 996  IEGLPSSKGKEVIF 1009


>emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 41/78 (52%), Positives = 56/78 (71%)
 Frame = +2

Query: 38   SSVKATYQKIKTLFYWHDLKKSVATHVKHCMVCQRCKYDNQAYLGLLQPLPVPNEVWEAI 217
            S ++AT  +IK+LF+W  L K VA  ++ C  C RCKY+  A  GLLQPLP+P  VW++I
Sbjct: 1093 SGIRATVVRIKSLFFWKGLSKDVADFIQKCETCLRCKYERVASPGLLQPLPIPAGVWQSI 1152

Query: 218  TMDFIEELPKSQGKEVIF 271
             MDFI++LPKS GK+ I+
Sbjct: 1153 AMDFIDKLPKSHGKDAIW 1170


>emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 41/78 (52%), Positives = 56/78 (71%)
 Frame = +2

Query: 38   SSVKATYQKIKTLFYWHDLKKSVATHVKHCMVCQRCKYDNQAYLGLLQPLPVPNEVWEAI 217
            S ++AT  +IK+LF+W  L K VA  ++ C  C RCKY+  A  GLLQPLP+P  VW++I
Sbjct: 1093 SGIRATVVRIKSLFFWKGLSKDVADFIQKCETCLRCKYERVASPGLLQPLPIPAGVWQSI 1152

Query: 218  TMDFIEELPKSQGKEVIF 271
             MDFI++LPKS GK+ I+
Sbjct: 1153 AMDFIDKLPKSHGKDAIW 1170


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