BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00046969
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510888.1| pentatricopeptide repeat-containing protein,...   165   4e-39
ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-35
ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago t...   134   1e-29
ref|XP_002512787.1| pentatricopeptide repeat-containing protein,...   119   3e-25
ref|XP_002873264.1| pentatricopeptide repeat-containing protein ...   118   6e-25

>ref|XP_002510888.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550003|gb|EEF51490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 554

 Score =  165 bits (417), Expect = 4e-39
 Identities = 80/138 (57%), Positives = 100/138 (72%)
 Frame = +1

Query: 1   LSYAANVFQTIQNPNLFVYNAMIRAYASKTINDVDGTNTYRSLFLYKQMLCNGITADCIT 180
           L+YAA++F  I+ PNL  YN MIRAYASK+  D D     ++L LYKQMLCN I+ DC+T
Sbjct: 51  LAYAADIFHYIKKPNLPFYNIMIRAYASKSNVDYDDARLCQALILYKQMLCNDISPDCLT 110

Query: 181 FPFILKECVRRQDYGTGRSIHSQIVRYGVHSDVFVGNSVISLYSACGDVEGARKMFDEMS 360
           FPF+LKEC R      GR IH   ++ G++SD+FV NS+IS YSAC  V  +RK+FDEMS
Sbjct: 111 FPFLLKECTRNVAIYGGRGIHGHAIKLGLYSDLFVQNSLISFYSACEFVSNSRKLFDEMS 170

Query: 361 VRDIVSWNSMVIGCLRCG 414
            RD+VSWNSM+IG LR G
Sbjct: 171 NRDVVSWNSMIIGYLRSG 188



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/140 (25%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
 Frame = +1

Query: 1   LSYAANVFQTIQ-NPNLFVYNAMIRAYASKTINDVDGTNTYRSLFLYKQMLC-------- 153
           L  + N+F+ ++ N N+  +N++I  +       V G     +L  + +M C        
Sbjct: 190 LDQSLNLFRKMKINRNVITWNSIITGF-------VQGGRPKEALEFFHEMQCLRDDDGIN 242

Query: 154 NGITADCITFPFILKECVRRQDYGTGRSIHSQIVRYGVHSDVFVGNSVISLYSACGDVEG 333
           N +  D IT   +L  C        G+ +HS + R G+  D+ +G +++ +Y  CG ++ 
Sbjct: 243 NKVRPDKITIASVLSACAHLGAIDHGKWVHSYLRRSGLECDMVIGTALVDMYGKCGCLQR 302

Query: 334 ARKMFDEMSVRDIVSWNSMV 393
           A ++F EMS +D ++W +M+
Sbjct: 303 AYEVFREMSEKDTLAWTAMI 322


>ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 540

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/137 (54%), Positives = 98/137 (71%)
 Frame = +1

Query: 4   SYAANVFQTIQNPNLFVYNAMIRAYASKTINDVDGTNTYRSLFLYKQMLCNGITADCITF 183
           SYA NVF  I+NP+L  YN MIRAY S  +   D T+  ++L LYKQM C  I  +C+TF
Sbjct: 72  SYATNVFHMIKNPDLRAYNIMIRAYIS--MESGDDTHFCKALMLYKQMFCKDIVPNCLTF 129

Query: 184 PFILKECVRRQDYGTGRSIHSQIVRYGVHSDVFVGNSVISLYSACGDVEGARKMFDEMSV 363
           PF+LK C +  D  TG++IH+Q++++G   DV+V NS+ISLY A G +  ARK+FDEM V
Sbjct: 130 PFLLKGCTQWLDGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLV 189

Query: 364 RDIVSWNSMVIGCLRCG 414
            D+V+WNSMVIGCLR G
Sbjct: 190 TDVVTWNSMVIGCLRNG 206



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
 Frame = +1

Query: 1   LSYAANVFQTIQNPNLFVYNAMIRAYASKTINDVDGTNTYRSLFLYKQMLC---NGITAD 171
           L  A ++F+ +   N+  +N++I   A        G +   SL L+ +M     + +  D
Sbjct: 208 LDMAMDLFRKMNGRNIITWNSIITGLAQ-------GGSAKESLELFHEMQILSDDMVKPD 260

Query: 172 CITFPFILKECVRRQDYGTGRSIHSQIVRYGVHSDVFVGNSVISLYSACGDVEGARKMFD 351
            IT   +L  C +      G+ +H  + R G+  DV +G +++++Y  CGDV+ A ++F+
Sbjct: 261 KITIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDVQKAFEIFE 320

Query: 352 EMSVRDIVSWNSMV 393
           EM  +D  +W  M+
Sbjct: 321 EMPEKDASAWTVMI 334


>ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355497290|gb|AES78493.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 541

 Score =  134 bits (336), Expect = 1e-29
 Identities = 73/138 (52%), Positives = 94/138 (68%), Gaps = 1/138 (0%)
 Frame = +1

Query: 4   SYAANVFQTIQNPNLFVYNAMIRAYASKTINDVDGTNTYRSLFLYKQMLCNGITADCITF 183
           +YA NVF  I+ P L VYN MIR+Y      D D    Y++L LYKQML  GI  + +TF
Sbjct: 73  NYANNVFHMIKYPELRVYNIMIRSYGCIEGGD-DSNCCYKALMLYKQMLNKGIVPNNLTF 131

Query: 184 PFILKECVRRQDYGT-GRSIHSQIVRYGVHSDVFVGNSVISLYSACGDVEGARKMFDEMS 360
           PF++K C R Q  GT G  IH+ ++++G  +DVFVGNS+ISL+   G  + ARK+FDEM 
Sbjct: 132 PFLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMF 191

Query: 361 VRDIVSWNSMVIGCLRCG 414
           VRD+VSWNSMV+G LR G
Sbjct: 192 VRDVVSWNSMVVGYLRNG 209



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/132 (24%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
 Frame = +1

Query: 10  AANVFQTIQNPNLFVYNAMIRAYASKTINDVDGTNTYRSLFLYKQM-LCNG---ITADCI 177
           A N+F+ +   N+  +N++I          V   +   SL ++ +M   +G   +  D I
Sbjct: 214 ALNLFRKMNGRNIITWNSIITGL-------VQAGHAKESLEIFHEMQFLSGDDVVKPDKI 266

Query: 178 TFPFILKECVRRQDYGTGRSIHSQIVRYGVHSDVFVGNSVISLYSACGDVEGARKMFDEM 357
           T   +L  C        G+ +H+ + +  +  DV +G +++++Y  CGDV+ A ++F++M
Sbjct: 267 TIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDM 326

Query: 358 SVRDIVSWNSMV 393
             +D  +W +M+
Sbjct: 327 PEKDASAWTAMI 338


>ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547798|gb|EEF49290.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 480

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/138 (39%), Positives = 85/138 (61%)
 Frame = +1

Query: 1   LSYAANVFQTIQNPNLFVYNAMIRAYASKTINDVDGTNTYRSLFLYKQMLCNGITADCIT 180
           + YA  +F  IQNP+ F +N MIRAY      + +G N+ ++L LY  M+C G + D  T
Sbjct: 80  VDYATLIFDQIQNPHTFTWNFMIRAY------NYNG-NSQQALLLYNLMICEGFSPDKFT 132

Query: 181 FPFILKECVRRQDYGTGRSIHSQIVRYGVHSDVFVGNSVISLYSACGDVEGARKMFDEMS 360
           FPF++K C+       G+ +H   ++ G   D F+ N+++ LY  CGD++ ARK+FD+M+
Sbjct: 133 FPFVIKACLDHSALDKGKEVHGFAIKTGFWKDTFLSNTLMDLYFKCGDLDYARKLFDKMA 192

Query: 361 VRDIVSWNSMVIGCLRCG 414
           VR +VSW + V G + CG
Sbjct: 193 VRSVVSWTTFVAGLVACG 210



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/131 (28%), Positives = 61/131 (46%)
 Frame = +1

Query: 1   LSYAANVFQTIQNPNLFVYNAMIRAYASKTINDVDGTNTYRSLFLYKQMLCNGITADCIT 180
           L  A   F  +   N+  + AMI  Y       V       +  L+++M    +  +  T
Sbjct: 212 LDTARAAFDEMPMRNVVSWTAMINGY-------VKNQRPQEAFELFQRMQLANVRPNGFT 264

Query: 181 FPFILKECVRRQDYGTGRSIHSQIVRYGVHSDVFVGNSVISLYSACGDVEGARKMFDEMS 360
              +L+ C        GR IH   +  G    VF+G ++I +YS CG +E A+K+F+EM 
Sbjct: 265 LVGLLRACTELGSLELGRRIHEYALENGFKVGVFLGTALIDMYSKCGSIEDAKKVFEEMQ 324

Query: 361 VRDIVSWNSMV 393
            + + +WNSM+
Sbjct: 325 KKSLATWNSMI 335


>ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319101|gb|EFH49523.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 624

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/138 (42%), Positives = 83/138 (60%)
 Frame = +1

Query: 1   LSYAANVFQTIQNPNLFVYNAMIRAYASKTINDVDGTNTYRSLFLYKQMLCNGITADCIT 180
           L YA  +F  IQNPNLFV+N +IR +++       G    ++   Y QML + I  D IT
Sbjct: 69  LGYAYGIFSQIQNPNLFVFNVLIRCFST-------GAEPSKAFGFYTQMLKSRIWPDNIT 121

Query: 181 FPFILKECVRRQDYGTGRSIHSQIVRYGVHSDVFVGNSVISLYSACGDVEGARKMFDEMS 360
           FPF++K     +    G   HSQIVR+G  +DV+V NS++ +Y+ CG +  A ++F +M 
Sbjct: 122 FPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMP 181

Query: 361 VRDIVSWNSMVIGCLRCG 414
            RD+VSW SMV G  +CG
Sbjct: 182 FRDVVSWTSMVAGYCKCG 199



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/130 (23%), Positives = 66/130 (50%)
 Frame = +1

Query: 10  AANVFQTIQNPNLFVYNAMIRAYASKTINDVDGTNTYRSLFLYKQMLCNGITADCITFPF 189
           A  +F  + + NLF ++ MI  YA     +       +++ L++ M   G+ A+      
Sbjct: 204 AREMFDEMPHRNLFTWSIMINGYAKNNCFE-------KAIDLFELMKREGVVANETVMVS 256

Query: 190 ILKECVRRQDYGTGRSIHSQIVRYGVHSDVFVGNSVISLYSACGDVEGARKMFDEMSVRD 369
           ++  C        G   H  +V+  +  ++ +G +++ +Y  CG++E A ++F+E+  +D
Sbjct: 257 VISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKD 316

Query: 370 IVSWNSMVIG 399
            +SW+S++ G
Sbjct: 317 SLSWSSIIKG 326