BLASTX nr result

ID: Angelica23_contig00046839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00046839
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60813.1| hypothetical protein VITISV_038722 [Vitis vinifera]    59   1e-09
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]    63   3e-08
ref|XP_002317178.1| predicted protein [Populus trichocarpa] gi|2...    57   6e-08
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...    52   1e-07
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]            52   1e-07

>emb|CAN60813.1| hypothetical protein VITISV_038722 [Vitis vinifera]
          Length = 566

 Score = 58.9 bits (141), Expect(2) = 1e-09
 Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
 Frame = -3

Query: 253 DAKALVKIHLAVTCTIFPRIMNITPAKQA*DILKAEFEGNERTK-IRLQSLRREFENLSE 77
           DAK L+ I   V   IFPRIM  + AK+A DIL+ EF+G+++T+ I+LQ+LRRE EN+  
Sbjct: 42  DAKTLLFIQQGVGNNIFPRIMRASKAKEAWDILQQEFQGDKKTRSIKLQALRRELENMKM 101

Query: 76  RWRNT 62
           +   T
Sbjct: 102 KENET 106



 Score = 28.1 bits (61), Expect(2) = 1e-09
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 81  VKDGEILKDYSSRMIKLVNELKSNDE 4
           +K+ E L + SSR ++LVN++KS  E
Sbjct: 101 MKENETLNELSSRFMELVNQMKSYGE 126


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = -3

Query: 259 KKDAKALVKIHLAVTCTIFPRIMNITPAKQA*DILKAEFEGNERTK-IRLQSLRREFENL 83
           K DAKAL+ I   V   IFPRIM  + AK+A DIL+ EF+G++RT+ ++LQ+LRRE EN+
Sbjct: 258 KMDAKALLFIQQGVGNNIFPRIMRASKAKEAWDILQQEFQGDKRTRSVKLQALRRELENM 317

Query: 82  SERWRNT 62
             +   T
Sbjct: 318 KMKENET 324


>ref|XP_002317178.1| predicted protein [Populus trichocarpa] gi|222860243|gb|EEE97790.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 57.4 bits (137), Expect(2) = 6e-08
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -3

Query: 259 KKDAKALVKIHLAVTCTIFPRIMNITPAKQA*DILKAEFEGNERTK-IRLQSLRREFENL 83
           +KDA AL  I  ++  TIFPRI   + AKQA D L+ EF G+ + + IRLQ LRRE EN+
Sbjct: 40  QKDASALYLIQQSLAITIFPRISEASTAKQAWDTLQKEFLGDSKVRTIRLQILRRELENI 99

Query: 82  SERWRNT 62
             ++  T
Sbjct: 100 KMKYSET 106



 Score = 24.3 bits (51), Expect(2) = 6e-08
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 81  VKDGEILKDYSSRMIKLVNELKSNDEN 1
           +K  E +KDY  R+  +VN+ +S  EN
Sbjct: 101 MKYSETVKDYHGRVKVVVNQTRSVGEN 127


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711922|gb|ABF99717.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1335

 Score = 52.4 bits (124), Expect(2) = 1e-07
 Identities = 27/58 (46%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = -3

Query: 253 DAKALVKIHLAVTCTIFPRIMNITPAKQA*DILKAEFEGNERT-KIRLQSLRREFENL 83
           DAKAL  I   V  ++FPRI+    +K+A D LK EF+G+++   ++LQ+LRR+F+NL
Sbjct: 62  DAKALFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNL 119



 Score = 28.1 bits (61), Expect(2) = 1e-07
 Identities = 11/27 (40%), Positives = 21/27 (77%)
 Frame = -1

Query: 81  VKDGEILKDYSSRMIKLVNELKSNDEN 1
           +K+ E +KDY SR+I++VN+++   E+
Sbjct: 121 MKESEKVKDYFSRVIEIVNQMRLYGED 147


>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa Indica Group]
          Length = 1314

 Score = 52.4 bits (124), Expect(2) = 1e-07
 Identities = 27/58 (46%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = -3

Query: 253 DAKALVKIHLAVTCTIFPRIMNITPAKQA*DILKAEFEGNERT-KIRLQSLRREFENL 83
           DAKAL  I   V  ++FPRI+    +K+A D LK EF+G+++   ++LQ+LRR+F+NL
Sbjct: 62  DAKALFLIQQGVAESLFPRIIGAKKSKEAWDKLKEEFQGSQKVLAVKLQTLRRQFQNL 119



 Score = 28.1 bits (61), Expect(2) = 1e-07
 Identities = 11/27 (40%), Positives = 21/27 (77%)
 Frame = -1

Query: 81  VKDGEILKDYSSRMIKLVNELKSNDEN 1
           +K+ E +KDY SR+I++VN+++   E+
Sbjct: 121 MKESEKVKDYFSRVIEIVNQMRLYGED 147


Top