BLASTX nr result

ID: Angelica23_contig00046666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00046666
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_002317568.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24

>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Vitis vinifera]
          Length = 848

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/110 (55%), Positives = 82/110 (74%)
 Frame = +2

Query: 2   SEEEDDYMRLDKELSIPWFSSMSRGSTSLYRKELARDRKQKWVFKGTQTTRFHRLVNMCA 181
           S+  +D   L+K L +PWF ++S  + SL RKE++R+RKQKWVFK TQ  R  RLV  CA
Sbjct: 90  SQLTNDEKPLEKVLDVPWFPTLSHNNISLRRKEVSRERKQKWVFKNTQGGRLDRLVKTCA 149

Query: 182 KKMGSDNTLEVFGKLGRETGVKEFNALMRLCINKARKTQDDEVILGQIYK 331
           +K+G++ T++VFGKLGRETGVKE+ AL+ +CI KAR + D+E  L QIYK
Sbjct: 150 QKLGTEATIQVFGKLGRETGVKEYKALLGICIEKARTSDDEEASLEQIYK 199


>ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Cucumis sativus]
          Length = 1295

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/101 (59%), Positives = 78/101 (77%)
 Frame = +2

Query: 29  LDKELSIPWFSSMSRGSTSLYRKELARDRKQKWVFKGTQTTRFHRLVNMCAKKMGSDNTL 208
           L+K L IPWFS  +  S +L+RKE++R+RK  WV K TQ+ RF RLV  CA ++GSD TL
Sbjct: 171 LEKLLDIPWFSIKTNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTL 230

Query: 209 EVFGKLGRETGVKEFNALMRLCINKARKTQDDEVILGQIYK 331
           EVFGKLGRETGVKE+NAL+ +C+ KA+ ++D EV+L QI K
Sbjct: 231 EVFGKLGRETGVKEYNALVGICLEKAKASKDVEVVLEQIGK 271


>ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|222858182|gb|EEE95729.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/108 (49%), Positives = 75/108 (69%)
 Frame = +2

Query: 2   SEEEDDYMRLDKELSIPWFSSMSRGSTSLYRKELARDRKQKWVFKGTQTTRFHRLVNMCA 181
           SEE +D   + K L IPW S +   +  + RK+++R+RKQKWVF  +Q    +R+V+ CA
Sbjct: 31  SEEAEDEELVKKALEIPWLSRLKNNNIGMLRKDVSRERKQKWVFTYSQVNHINRIVDTCA 90

Query: 182 KKMGSDNTLEVFGKLGRETGVKEFNALMRLCINKARKTQDDEVILGQI 325
            K+G+DN +EVFGKLGRETG+KEFNALM+  I + R+T D+ V +  I
Sbjct: 91  DKLGTDNAMEVFGKLGRETGLKEFNALMKKYIEQCRETDDESVAMKHI 138


>ref|XP_002317568.1| predicted protein [Populus trichocarpa] gi|222860633|gb|EEE98180.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/107 (48%), Positives = 74/107 (69%)
 Frame = +2

Query: 5   EEEDDYMRLDKELSIPWFSSMSRGSTSLYRKELARDRKQKWVFKGTQTTRFHRLVNMCAK 184
           EE DD   ++     PW S+  + +  + RKE++ +RKQKW+FK +Q   F RLV+ CA 
Sbjct: 113 EEADDEKVVENVFKTPWLSNWKKNNIGIQRKEISYERKQKWIFKNSQVYCFDRLVDTCAF 172

Query: 185 KMGSDNTLEVFGKLGRETGVKEFNALMRLCINKARKTQDDEVILGQI 325
           K+G+D T++VFG LGRETG+KEFNALM++CI + R+T D+ V   QI
Sbjct: 173 KLGTDATMDVFGMLGRETGLKEFNALMKMCIEQCRETDDENVAKEQI 219


>ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Glycine max]
          Length = 1117

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/109 (47%), Positives = 75/109 (68%)
 Frame = +2

Query: 5   EEEDDYMRLDKELSIPWFSSMSRGSTSLYRKELARDRKQKWVFKGTQTTRFHRLVNMCAK 184
           E +DD  +  + + IPW   +S G  S  RK++AR+RKQKW+FK T   RF RL+ MCA 
Sbjct: 86  EIDDDEEKRKQTVDIPWILDLSHGKLSEKRKDVARERKQKWIFKYTSDDRFDRLIKMCAD 145

Query: 185 KMGSDNTLEVFGKLGRETGVKEFNALMRLCINKARKTQDDEVILGQIYK 331
           K+G   T+ VFG+LGRETGVKE+N L+++C+ KAR T D+ + + ++ K
Sbjct: 146 KLGVGKTVNVFGQLGRETGVKEYNTLIKMCVKKARATDDEFIGVREMSK 194


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