BLASTX nr result

ID: Angelica23_contig00046623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00046623
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313634.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002525711.1| hypothetical protein RCOM_1321840 [Ricinus c...    90   2e-16
ref|XP_003592245.1| Double-stranded RNA binding protein [Medicag...    86   4e-15
ref|XP_002336063.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14

>ref|XP_002313634.1| predicted protein [Populus trichocarpa] gi|222850042|gb|EEE87589.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 43/74 (58%), Positives = 57/74 (77%)
 Frame = +3

Query: 36  MYKTKLQEMCQKKKWGLPKYTYVREGPDHNPSFKASVVVNGVTFDTANDSSSSKDAQNDA 215
           M KTKLQE+C K++WGLPKY+ +++GPDH P FKASV VNG++F ++    SSKDA NDA
Sbjct: 1   MDKTKLQEVCHKRQWGLPKYSAMKDGPDHTPCFKASVYVNGISFHSSASCKSSKDAHNDA 60

Query: 216 ARLAVFHFTNNSEP 257
           A++A  HFT+   P
Sbjct: 61  AKMAFLHFTSPPPP 74


>ref|XP_002525711.1| hypothetical protein RCOM_1321840 [Ricinus communis]
           gi|223535011|gb|EEF36694.1| hypothetical protein
           RCOM_1321840 [Ricinus communis]
          Length = 162

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/74 (55%), Positives = 56/74 (75%)
 Frame = +3

Query: 36  MYKTKLQEMCQKKKWGLPKYTYVREGPDHNPSFKASVVVNGVTFDTANDSSSSKDAQNDA 215
           MYKTKLQE+C +K W LP+Y+  + G DHNP F A+V+VNG +F +++ S SSK AQN+A
Sbjct: 1   MYKTKLQELCHQKTWSLPEYSTTKVGQDHNPIFHATVIVNGYSFSSSSPSKSSKLAQNNA 60

Query: 216 ARLAVFHFTNNSEP 257
           A+LA  HF++ S P
Sbjct: 61  AKLAFDHFSSVSLP 74


>ref|XP_003592245.1| Double-stranded RNA binding protein [Medicago truncatula]
           gi|357462121|ref|XP_003601342.1| Double-stranded RNA
           binding protein [Medicago truncatula]
           gi|355481293|gb|AES62496.1| Double-stranded RNA binding
           protein [Medicago truncatula]
           gi|355490390|gb|AES71593.1| Double-stranded RNA binding
           protein [Medicago truncatula]
          Length = 424

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 38/70 (54%), Positives = 53/70 (75%)
 Frame = +3

Query: 36  MYKTKLQEMCQKKKWGLPKYTYVREGPDHNPSFKASVVVNGVTFDTANDSSSSKDAQNDA 215
           M+KTKLQ++C +++W LPKYT   +GP H PSF ASV VNGVTF +++  +S+K+AQN A
Sbjct: 1   MFKTKLQQLCHQRRWSLPKYTATNDGPQHKPSFNASVHVNGVTFASSDAFNSAKEAQNQA 60

Query: 216 ARLAVFHFTN 245
           A  A  +FT+
Sbjct: 61  AMKAFRNFTS 70


>ref|XP_002336063.1| predicted protein [Populus trichocarpa] gi|222869864|gb|EEF06995.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/74 (52%), Positives = 52/74 (70%)
 Frame = +3

Query: 36  MYKTKLQEMCQKKKWGLPKYTYVREGPDHNPSFKASVVVNGVTFDTANDSSSSKDAQNDA 215
           MYK+KLQ +CQ++ W LP Y   ++G DHNP F A+V VN  +F + + SSSSK AQ+DA
Sbjct: 1   MYKSKLQAVCQQRGWELPTYQVTKQGKDHNPLFSATVTVNATSFSSPSPSSSSKTAQSDA 60

Query: 216 ARLAVFHFTNNSEP 257
           A+LA  HF+  S P
Sbjct: 61  AKLAFNHFSLISSP 74


>ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|222858085|gb|EEE95632.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/69 (53%), Positives = 51/69 (73%)
 Frame = +3

Query: 36  MYKTKLQEMCQKKKWGLPKYTYVREGPDHNPSFKASVVVNGVTFDTANDSSSSKDAQNDA 215
           MYK+KLQE+CQ++ W LP Y   R+G  HNP F A+V VN ++F + + S++SK AQNDA
Sbjct: 1   MYKSKLQELCQQRAWELPTYESSRQGQAHNPRFLATVTVNNISFHSPSPSNTSKKAQNDA 60

Query: 216 ARLAVFHFT 242
           A+LA  HF+
Sbjct: 61  AKLAYEHFS 69


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