BLASTX nr result

ID: Angelica23_contig00046608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00046608
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi...    95   7e-18
emb|CBI23204.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16
ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containi...    86   2e-15
ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14

>ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/81 (55%), Positives = 62/81 (76%)
 Frame = +1

Query: 1   PSSVTMLVLLSGVCKDVFSVECLFGCVVKYGFDFKLNVVNSLISLFGKCGRVEDARELFE 180
           PSSVTML LLSGV  ++  ++CL  CV++YGF   + + NS+++++ KCGRVEDA+ LFE
Sbjct: 147 PSSVTMLGLLSGVL-ELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFE 205

Query: 181 SMGRKDIVSWNSLVSGYALTG 243
            M  +D++SWNSLVSGYA  G
Sbjct: 206 LMDARDVISWNSLVSGYAQLG 226



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
 Frame = +1

Query: 1   PSSVTMLVLLSGVCKDVFSVEC---LFGCVVKYGFDFKLNVVNSLISLFGKCGRVEDARE 171
           PS+ T+  +L+  C ++ S      + G +++      +   NSL++++ KCG +E +  
Sbjct: 346 PSTATIASVLAA-CAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCS 404

Query: 172 LFESMGRKDIVSWNSLVSGYALTG 243
           +F+ M R+DIVSWN++VSG+A  G
Sbjct: 405 VFDRMSRRDIVSWNAIVSGHAQNG 428


>emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/81 (55%), Positives = 62/81 (76%)
 Frame = +1

Query: 1   PSSVTMLVLLSGVCKDVFSVECLFGCVVKYGFDFKLNVVNSLISLFGKCGRVEDARELFE 180
           PSSVTML LLSGV  ++  ++CL  CV++YGF   + + NS+++++ KCGRVEDA+ LFE
Sbjct: 147 PSSVTMLGLLSGVL-ELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFE 205

Query: 181 SMGRKDIVSWNSLVSGYALTG 243
            M  +D++SWNSLVSGYA  G
Sbjct: 206 LMDARDVISWNSLVSGYAQLG 226



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
 Frame = +1

Query: 1   PSSVTMLVLLSGVCKDVFSVEC---LFGCVVKYGFDFKLNVVNSLISLFGKCGRVEDARE 171
           PS+ T+  +L+  C ++ S      + G +++      +   NSL++++ KCG +E +  
Sbjct: 346 PSTATIASVLAA-CAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCS 404

Query: 172 LFESMGRKDIVSWNSLVSGYALTG 243
           +F+ M R+DIVSWN++VSG+A  G
Sbjct: 405 VFDRMSRRDIVSWNAIVSGHAQNG 428


>ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/81 (50%), Positives = 60/81 (74%)
 Frame = +1

Query: 1   PSSVTMLVLLSGVCKDVFSVECLFGCVVKYGFDFKLNVVNSLISLFGKCGRVEDARELFE 180
           PSSVT+L LL GV  ++  V+CL GC + YGF   +N+ NS+++++GKCG +E +R+LF+
Sbjct: 160 PSSVTVLSLLFGV-SELAHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFD 218

Query: 181 SMGRKDIVSWNSLVSGYALTG 243
            M  +D+VSWNSL+S YA  G
Sbjct: 219 YMDHRDLVSWNSLISAYAQIG 239



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/84 (30%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = +1

Query: 1   PSSVTMLVLLSGVCKDVFSVEC---LFGCVVKYGFDFKLNVVNSLISLFGKCGRVEDARE 171
           PS+ TM  +++  C  + S      + G +++      +   NSL++++ KCG ++ +  
Sbjct: 359 PSTATMASVITA-CAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSI 417

Query: 172 LFESMGRKDIVSWNSLVSGYALTG 243
           +F+ M R+D+VSWN++V+GYA  G
Sbjct: 418 VFDMMNRRDLVSWNAMVTGYAQNG 441


>ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/81 (51%), Positives = 59/81 (72%)
 Frame = +1

Query: 1   PSSVTMLVLLSGVCKDVFSVECLFGCVVKYGFDFKLNVVNSLISLFGKCGRVEDARELFE 180
           PSSVTML LL GV  ++  V+CL G  + YGF   +N+ NS++S++GKC  +E +R+LF+
Sbjct: 168 PSSVTMLSLLFGV-SELAHVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFD 226

Query: 181 SMGRKDIVSWNSLVSGYALTG 243
            M ++D+VSWNSLVS YA  G
Sbjct: 227 YMDQRDLVSWNSLVSAYAQIG 247


>ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/81 (49%), Positives = 59/81 (72%)
 Frame = +1

Query: 1   PSSVTMLVLLSGVCKDVFSVECLFGCVVKYGFDFKLNVVNSLISLFGKCGRVEDARELFE 180
           P+SVT+L LL G+ K    + CL   ++ +GF+  L + NS+++++GKCGR+ DAR LFE
Sbjct: 148 PTSVTLLSLLPGISKLPLLL-CLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFE 206

Query: 181 SMGRKDIVSWNSLVSGYALTG 243
           S+G +DIVSWNSL+S Y+  G
Sbjct: 207 SIGCRDIVSWNSLLSAYSKIG 227


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