BLASTX nr result

ID: Angelica23_contig00046375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00046375
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23
emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]   112   3e-23
ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_002512558.1| pentatricopeptide repeat-containing protein,...    98   6e-19
ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17

>ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial [Vitis vinifera]
           gi|296088528|emb|CBI37519.3| unnamed protein product
           [Vitis vinifera]
          Length = 525

 Score =  112 bits (280), Expect = 3e-23
 Identities = 62/126 (49%), Positives = 80/126 (63%), Gaps = 5/126 (3%)
 Frame = -3

Query: 366 MKAAMSCSLSFLTRHPTRLFCSVPLKPQL-----IPSLQPSNDADLISQILLEHHNPFHS 202
           +  +++  L F +  P   F S+P  P       +PSLQPS DADLIS+ILL+HHNPFH+
Sbjct: 11  ISTSIALKLQFFSITPCH-FSSIPQPPDDALSTGLPSLQPSYDADLISKILLQHHNPFHA 69

Query: 201 MESSLQLHGISXXXXXXXXXXXXXXXLSKIAFAFFSWAKTQPHLVPDVMAYNIVIDSLGK 22
           MESSLQL+GI+               +SKIA +FF WAK Q H   DV++YN++ID L K
Sbjct: 70  MESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDILAK 129

Query: 21  VRQFDV 4
           VRQFDV
Sbjct: 130 VRQFDV 135


>emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
          Length = 525

 Score =  112 bits (280), Expect = 3e-23
 Identities = 62/126 (49%), Positives = 80/126 (63%), Gaps = 5/126 (3%)
 Frame = -3

Query: 366 MKAAMSCSLSFLTRHPTRLFCSVPLKPQL-----IPSLQPSNDADLISQILLEHHNPFHS 202
           +  +++  L F +  P   F S+P  P       +PSLQPS DADLIS+ILL+HHNPFH+
Sbjct: 11  ISTSIALKLQFFSITPCH-FSSIPQPPDDALSTGLPSLQPSYDADLISKILLQHHNPFHA 69

Query: 201 MESSLQLHGISXXXXXXXXXXXXXXXLSKIAFAFFSWAKTQPHLVPDVMAYNIVIDSLGK 22
           MESSLQL+GI+               +SKIA +FF WAK Q H   DV++YN++ID L K
Sbjct: 70  MESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDILAK 129

Query: 21  VRQFDV 4
           VRQFDV
Sbjct: 130 VRQFDV 135


>ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Cucumis sativus]
           gi|449523938|ref|XP_004168980.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Cucumis sativus]
          Length = 506

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/102 (50%), Positives = 62/102 (60%)
 Frame = -3

Query: 312 LFCSVPLKPQLIPSLQPSNDADLISQILLEHHNPFHSMESSLQLHGISXXXXXXXXXXXX 133
           +  S+     L+P +QPS DADL+SQILL HHNPFHSMESSLQLH IS            
Sbjct: 18  IISSIRFLSSLLPQIQPSKDADLVSQILLHHHNPFHSMESSLQLHSISFSSHLLDQTLLR 77

Query: 132 XXXLSKIAFAFFSWAKTQPHLVPDVMAYNIVIDSLGKVRQFD 7
               SKIA +FF +A + P       +YNI++D L KVRQFD
Sbjct: 78  LTHHSKIALSFFDYANSLPSNPISTTSYNILLDILAKVRQFD 119


>ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548519|gb|EEF50010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 511

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 47/92 (51%), Positives = 62/92 (67%)
 Frame = -3

Query: 279 IPSLQPSNDADLISQILLEHHNPFHSMESSLQLHGISXXXXXXXXXXXXXXXLSKIAFAF 100
           +PSL+PSNDA+++S+ILL HHNPFH+MESSLQLHGI+                SKIA +F
Sbjct: 30  LPSLEPSNDAEIVSEILLNHHNPFHAMESSLQLHGITLSSSLLHQTLLRLRHNSKIALSF 89

Query: 99  FSWAKTQPHLVPDVMAYNIVIDSLGKVRQFDV 4
           F ++ + P    +   YN++ID L KVRQFDV
Sbjct: 90  FHYSLSLPSSSVNTTTYNLIIDILSKVRQFDV 121


>ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial-like [Glycine max]
          Length = 510

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 52/120 (43%), Positives = 71/120 (59%)
 Frame = -3

Query: 363 KAAMSCSLSFLTRHPTRLFCSVPLKPQLIPSLQPSNDADLISQILLEHHNPFHSMESSLQ 184
           K   S  LSFL+    R FCS+P      PS +  +DA+LIS++LL+HHNPFH+ ES LQ
Sbjct: 5   KPRQSHHLSFLSPPLLRRFCSLPP-----PSPRDESDAELISKLLLQHHNPFHATESPLQ 59

Query: 183 LHGISXXXXXXXXXXXXXXXLSKIAFAFFSWAKTQPHLVPDVMAYNIVIDSLGKVRQFDV 4
           LHGI+                SKIA + F +AKT P+      ++ ++ID++ KVRQFDV
Sbjct: 60  LHGITLTPTLLFHTLLRLKNHSKIALSLFHYAKTLPNPPLSHSSFTLLIDTMAKVRQFDV 119


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