BLASTX nr result

ID: Angelica23_contig00046243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00046243
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat...    59   3e-07
emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]    59   3e-07
emb|CBI35192.3| unnamed protein product [Vitis vinifera]               58   7e-07
ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat...    58   7e-07

>ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/61 (52%), Positives = 40/61 (65%)
 Frame = -1

Query: 341 NGCLPNDVTYNTIIRGSLVNRKFEEAVVLIESMRARNFSADASTTSMVLKLFSTGEQDPS 162
           NGCL N  TYNTI +G L N K   A+ L+E M AR FSAD STT++++K+ S    D S
Sbjct: 470 NGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQS 529

Query: 161 V 159
           V
Sbjct: 530 V 530


>ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = -1

Query: 341 NGCLPNDVTYNTIIRGSLVNRKFEEAVVLIESMRARNFSADASTTSMVLKLFSTGEQDPS 162
           NGC P+  TYNTI +G L N++   A+ L++ M AR FSAD STT++++++    + D S
Sbjct: 517 NGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQS 576

Query: 161 VLAFRKWFLQ 132
           V      F+Q
Sbjct: 577 VKQILSEFVQ 586


>emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = -1

Query: 341 NGCLPNDVTYNTIIRGSLVNRKFEEAVVLIESMRARNFSADASTTSMVLKLFSTGEQDPS 162
           NGC P+  TYNTI +G L N++   A+ L++ M AR FSAD STT++++++    + D S
Sbjct: 516 NGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQS 575

Query: 161 VLAFRKWFLQ 132
           V      F+Q
Sbjct: 576 VKQILSEFVQ 585


>emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/61 (47%), Positives = 37/61 (60%)
 Frame = -1

Query: 341 NGCLPNDVTYNTIIRGSLVNRKFEEAVVLIESMRARNFSADASTTSMVLKLFSTGEQDPS 162
           NGC PND TYN I RG L N +    + L+E M AR FS D STT++++ + S    D S
Sbjct: 459 NGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQS 518

Query: 161 V 159
           V
Sbjct: 519 V 519


>ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/61 (47%), Positives = 37/61 (60%)
 Frame = -1

Query: 341 NGCLPNDVTYNTIIRGSLVNRKFEEAVVLIESMRARNFSADASTTSMVLKLFSTGEQDPS 162
           NGC PND TYN I RG L N +    + L+E M AR FS D STT++++ + S    D S
Sbjct: 519 NGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQS 578

Query: 161 V 159
           V
Sbjct: 579 V 579


Top