BLASTX nr result

ID: Angelica23_contig00046121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00046121
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi...   201   7e-50
emb|CBI28420.3| unnamed protein product [Vitis vinifera]              201   7e-50
ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containi...   189   2e-46
ref|XP_002531691.1| pentatricopeptide repeat-containing protein,...   156   2e-36
ref|XP_002867972.1| pentatricopeptide repeat-containing protein ...   152   4e-35

>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  201 bits (510), Expect = 7e-50
 Identities = 89/130 (68%), Positives = 109/130 (83%)
 Frame = +1

Query: 1   VHSYLAKTGYNIEGVLGTSLIEMYCKCGGVESALAVFHSVQEKKLGHWTALIVGLGTHGL 180
           +HSY+ K G+ ++G+LGTSLIEMY KCG +ESAL VF ++Q+KK+GHWTA+IVGLG HG+
Sbjct: 328 IHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGM 387

Query: 181 TKNVFELFHEMLANGVKPNAITFIGVLNACNHAGLVRNGQRYFDMMLKEYGIEPTVEHYG 360
             +   LF EM   G+KPNAI FIGVLNACNHAGLV +G++YFDMM+ EY IEPT+EHYG
Sbjct: 388 ANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYG 447

Query: 361 CLVDILCRAG 390
           CLVDILCRAG
Sbjct: 448 CLVDILCRAG 457


>emb|CBI28420.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  201 bits (510), Expect = 7e-50
 Identities = 89/130 (68%), Positives = 109/130 (83%)
 Frame = +1

Query: 1   VHSYLAKTGYNIEGVLGTSLIEMYCKCGGVESALAVFHSVQEKKLGHWTALIVGLGTHGL 180
           +HSY+ K G+ ++G+LGTSLIEMY KCG +ESAL VF ++Q+KK+GHWTA+IVGLG HG+
Sbjct: 280 IHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGM 339

Query: 181 TKNVFELFHEMLANGVKPNAITFIGVLNACNHAGLVRNGQRYFDMMLKEYGIEPTVEHYG 360
             +   LF EM   G+KPNAI FIGVLNACNHAGLV +G++YFDMM+ EY IEPT+EHYG
Sbjct: 340 ANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYG 399

Query: 361 CLVDILCRAG 390
           CLVDILCRAG
Sbjct: 400 CLVDILCRAG 409


>ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449511814|ref|XP_004164061.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  189 bits (481), Expect = 2e-46
 Identities = 84/130 (64%), Positives = 104/130 (80%)
 Frame = +1

Query: 1   VHSYLAKTGYNIEGVLGTSLIEMYCKCGGVESALAVFHSVQEKKLGHWTALIVGLGTHGL 180
           VHSY+ K+G+  +GVLGT LIEMY KCG V+SAL VF S+ +KKLGHWT++IVGLG HGL
Sbjct: 330 VHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGL 389

Query: 181 TKNVFELFHEMLANGVKPNAITFIGVLNACNHAGLVRNGQRYFDMMLKEYGIEPTVEHYG 360
            +   ELF EM   G+KP+AITFIGVLNAC+HAG   +  RYF MM  +YGI+P++EHYG
Sbjct: 390 VEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYG 449

Query: 361 CLVDILCRAG 390
           CL+D+LCRAG
Sbjct: 450 CLIDVLCRAG 459


>ref|XP_002531691.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528667|gb|EEF30682.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 434

 Score =  156 bits (394), Expect = 2e-36
 Identities = 68/106 (64%), Positives = 86/106 (81%)
 Frame = +1

Query: 1   VHSYLAKTGYNIEGVLGTSLIEMYCKCGGVESALAVFHSVQEKKLGHWTALIVGLGTHGL 180
           +HSY+ K G+ ++GVL TSLI MY KCG +ESAL+VF  + +KKLGHWTA+IVGLG HG+
Sbjct: 323 MHSYMVKNGFQLDGVLATSLINMYSKCGNIESALSVFQLITKKKLGHWTAIIVGLGMHGM 382

Query: 181 TKNVFELFHEMLANGVKPNAITFIGVLNACNHAGLVRNGQRYFDMM 318
             N  E FHEM   G++P+AITFIGVLNAC+HAGLV +G++YFDMM
Sbjct: 383 ADNALEFFHEMCRTGMRPHAITFIGVLNACSHAGLVEDGRKYFDMM 428


>ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297313808|gb|EFH44231.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 535

 Score =  152 bits (383), Expect = 4e-35
 Identities = 67/130 (51%), Positives = 90/130 (69%)
 Frame = +1

Query: 1   VHSYLAKTGYNIEGVLGTSLIEMYCKCGGVESALAVFHSVQEKKLGHWTALIVGLGTHGL 180
           VH Y+ K G  IEG + T+L++MY KCG ++ AL VF    ++ +  W ++I GL  HGL
Sbjct: 296 VHVYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGL 355

Query: 181 TKNVFELFHEMLANGVKPNAITFIGVLNACNHAGLVRNGQRYFDMMLKEYGIEPTVEHYG 360
            K+  E+F EM+  G KPN ITFIGVL+ACNH GL+   ++ F+MM   YGIEPT+EHYG
Sbjct: 356 GKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYG 415

Query: 361 CLVDILCRAG 390
           C+VD+L R G
Sbjct: 416 CMVDLLGRMG 425


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