BLASTX nr result

ID: Angelica23_contig00045689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00045689
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_002316137.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi...   117   8e-25
ref|NP_178398.1| pentatricopeptide repeat-containing protein [Ar...   115   3e-24
gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thali...   115   3e-24

>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
           protein product [Vitis vinifera]
          Length = 595

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/85 (68%), Positives = 72/85 (84%)
 Frame = -3

Query: 257 LDDAVSVFESMAFKDTPAWSAMIMAYALHGQGGRAISLFEDMRKARVQPDGITFLGLINA 78
           LDDAV VFE+MA +DT AWSAMIMAYA+HG G +A+SLF++MRKA  +PD ITFLGL+ A
Sbjct: 273 LDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYA 332

Query: 77  CNHTGWVEEGWKYFISMKDKYGINP 3
           C+HTG VEEG++YF  M+DKYG+ P
Sbjct: 333 CSHTGLVEEGFEYFYGMRDKYGVIP 357


>ref|XP_002316137.1| predicted protein [Populus trichocarpa] gi|222865177|gb|EEF02308.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/85 (64%), Positives = 71/85 (83%)
 Frame = -3

Query: 257 LDDAVSVFESMAFKDTPAWSAMIMAYALHGQGGRAISLFEDMRKARVQPDGITFLGLINA 78
           LD A+SVFESM+ +DT AWSAMI+AYA+HGQG   +S+FE+M +A+VQPD ITFLGL+ A
Sbjct: 279 LDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYA 338

Query: 77  CNHTGWVEEGWKYFISMKDKYGINP 3
           C+HTG V+EG++YF SM + YGI P
Sbjct: 339 CSHTGLVDEGFRYFYSMSEVYGIIP 363


>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score =  117 bits (294), Expect = 8e-25
 Identities = 55/85 (64%), Positives = 69/85 (81%)
 Frame = -3

Query: 257 LDDAVSVFESMAFKDTPAWSAMIMAYALHGQGGRAISLFEDMRKARVQPDGITFLGLINA 78
           LDDAVSVF+ M  +DT AWSAMI+AYA HG G +AIS+  +M+KA+VQPD ITFLG++ A
Sbjct: 287 LDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYA 346

Query: 77  CNHTGWVEEGWKYFISMKDKYGINP 3
           C+HTG VEEG++YF SM  +YGI P
Sbjct: 347 CSHTGLVEEGYEYFHSMTHEYGIVP 371


>ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g02980 gi|3461822|gb|AAC32916.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250557|gb|AEC05651.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 603

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = -3

Query: 257 LDDAVSVFESMAFKDTPAWSAMIMAYALHGQGGRAISLFEDMRKARVQPDGITFLGLINA 78
           LDDAVS+FE M +KDT AWSAMI+AYA HG+  +++ +FE MR   VQPD ITFLGL+NA
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNA 340

Query: 77  CNHTGWVEEGWKYFISMKDKYGINP 3
           C+HTG VEEG KYF  M  K+GI P
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVP 365


>gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
          Length = 603

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/85 (64%), Positives = 66/85 (77%)
 Frame = -3

Query: 257 LDDAVSVFESMAFKDTPAWSAMIMAYALHGQGGRAISLFEDMRKARVQPDGITFLGLINA 78
           LDDAVS+FE M +KDT AWSAMI+AYA HG+  +++ +FE MR   VQPD ITFLGL+NA
Sbjct: 281 LDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNA 340

Query: 77  CNHTGWVEEGWKYFISMKDKYGINP 3
           C+HTG VEEG KYF  M  K+GI P
Sbjct: 341 CSHTGRVEEGRKYFSQMVSKFGIVP 365


Top