BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00045685
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883101.1| pentatricopeptide repeat-containing protein ...   105   4e-21
ref|NP_188429.1| pentatricopeptide repeat-containing protein [Ar...   102   3e-20
ref|XP_002322098.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002529554.1| pentatricopeptide repeat-containing protein,...    95   5e-18
ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17

>ref|XP_002883101.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328941|gb|EFH59360.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 689

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/85 (61%), Positives = 64/85 (75%)
 Frame = +3

Query: 3   RFLMFITSAYTVPDERTCNVIIATLLDYRNPDATLLVLNRLLEFKPHFVASLCNYNRLIH 182
           RFL+F+ S + +PDERTCNVIIA LLD R+P +T  V+ RL+ FK  FV SL NYNRLI+
Sbjct: 112 RFLLFVASGF-IPDERTCNVIIARLLDLRSPVSTFGVIQRLIGFKKEFVPSLTNYNRLIN 170

Query: 183 QFCGVFRVRHAHRLVFDMIRRGHSP 257
           Q C ++RV  AH+LVFDM  RGH P
Sbjct: 171 QLCLIYRVIDAHKLVFDMRNRGHLP 195


>ref|NP_188429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274006|sp|Q9LSK8.1|PP240_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g18020 gi|11994208|dbj|BAB01330.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332642514|gb|AEE76035.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 688

 Score =  102 bits (255), Expect = 3e-20
 Identities = 51/85 (60%), Positives = 65/85 (76%)
 Frame = +3

Query: 3   RFLMFITSAYTVPDERTCNVIIATLLDYRNPDATLLVLNRLLEFKPHFVASLCNYNRLIH 182
           RFL+F+ S + +PDERTCNVIIA LL  R+P +TL V++RL+ FK  FV SL NYNRL++
Sbjct: 112 RFLLFLASGF-IPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMN 170

Query: 183 QFCGVFRVRHAHRLVFDMIRRGHSP 257
           Q C ++RV  AH+LVFDM  RGH P
Sbjct: 171 QLCTIYRVIDAHKLVFDMRNRGHLP 195


>ref|XP_002322098.1| predicted protein [Populus trichocarpa] gi|222869094|gb|EEF06225.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/85 (58%), Positives = 63/85 (74%)
 Frame = +3

Query: 3   RFLMFITSAYTVPDERTCNVIIATLLDYRNPDATLLVLNRLLEFKPHFVASLCNYNRLIH 182
           R ++F+TS   VPDERTCNV++A LL  ++P  TL V++RL+EFKP FV SL NYNRLI 
Sbjct: 107 RLIIFLTSL-CVPDERTCNVLVARLLHSKDPFRTLNVIHRLIEFKPEFVPSLINYNRLID 165

Query: 183 QFCGVFRVRHAHRLVFDMIRRGHSP 257
           QFC V     AHR+++DMI RGH P
Sbjct: 166 QFCSVSLPNVAHRMLYDMINRGHCP 190


>ref|XP_002529554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530966|gb|EEF32823.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 678

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 52/85 (61%), Positives = 58/85 (68%)
 Frame = +3

Query: 3   RFLMFITSAYTVPDERTCNVIIATLLDYRNPDATLLVLNRLLEFKPHFVASLCNYNRLIH 182
           RFL+ I S   VPDERTCNV+IA LLD + P ATL VL RL   KP FV SL NYNR I+
Sbjct: 115 RFLLCIASD-CVPDERTCNVLIARLLDSQYPHATLHVLYRLFHVKPQFVPSLINYNRFIY 173

Query: 183 QFCGVFRVRHAHRLVFDMIRRGHSP 257
           Q C   +   AHRL+FDMI RGH P
Sbjct: 174 QCCEFSQPDVAHRLLFDMISRGHCP 198


>ref|XP_004160441.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Cucumis sativus]
          Length = 681

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/85 (57%), Positives = 58/85 (68%)
 Frame = +3

Query: 3   RFLMFITSAYTVPDERTCNVIIATLLDYRNPDATLLVLNRLLEFKPHFVASLCNYNRLIH 182
           RF++ I S   VPDERTCNV+IA LLDYR+P  TL +L  L + KP FV S+ NYNRLI 
Sbjct: 111 RFMLSIASR-CVPDERTCNVLIARLLDYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLID 169

Query: 183 QFCGVFRVRHAHRLVFDMIRRGHSP 257
           QFC       AHR++FDM  RGH P
Sbjct: 170 QFCSFSLPNVAHRVLFDMKSRGHCP 194