BLASTX nr result

ID: Angelica23_contig00045671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00045671
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...    86   4e-15
ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212...    86   4e-15
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi...    85   7e-15
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]    83   2e-14
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...    81   8e-14

>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/93 (39%), Positives = 60/93 (64%)
 Frame = +1

Query: 31   TWIMDSGATDHMCFDLSMFSEYKTLQNSGNHITIPNGKQVLITHIGIVHLQNDIILQDVL 210
            TWI+DSGA+ H+C D  MF+   + QN    + +P   ++ + HIG V + ND++L+DVL
Sbjct: 1663 TWIIDSGASSHICHDKFMFTNLYSAQNM--FVILPTKTRLKVEHIGDVFISNDLVLKDVL 1720

Query: 211  FVPDFKFNLISIPKPCRDLNTKVTFTDHKCFLQ 309
            ++PDFK+NL+S+    +D    ++F D  C +Q
Sbjct: 1721 YIPDFKYNLLSVSTLLKDDKFAISFADSNCLIQ 1753


>ref|XP_004141415.1| PREDICTED: uncharacterized protein LOC101212632 [Cucumis sativus]
           gi|449449869|ref|XP_004142687.1| PREDICTED:
           uncharacterized protein LOC101213831 [Cucumis sativus]
          Length = 440

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/93 (39%), Positives = 60/93 (64%)
 Frame = +1

Query: 31  TWIMDSGATDHMCFDLSMFSEYKTLQNSGNHITIPNGKQVLITHIGIVHLQNDIILQDVL 210
           TWI+DSGA+ H+C D  MF+   + QN    + +P   ++ + HIG V + ND++L+DVL
Sbjct: 319 TWIIDSGASSHICHDKFMFTNLYSAQNM--FVILPTKTRLKVEHIGDVFISNDLVLKDVL 376

Query: 211 FVPDFKFNLISIPKPCRDLNTKVTFTDHKCFLQ 309
           ++PDFK+NL+S+    +D    ++F D  C +Q
Sbjct: 377 YIPDFKYNLLSVSTLLKDDKFAISFADSNCLIQ 409


>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
           gi|7267797|emb|CAB81200.1| putative retrotransposon
           polyprotein [Arabidopsis thaliana]
          Length = 1203

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/96 (43%), Positives = 62/96 (64%)
 Frame = +1

Query: 22  TNSTWIMDSGATDHMCFDLSMFSEYKTLQNSGNHITIPNGKQVLITHIGIVHLQNDIILQ 201
           ++  WI+DSGA+ H+C DL+MF E   +  SG  +T+PNG +V ITH G + + + +IL 
Sbjct: 95  SSDAWIIDSGASSHVCSDLTMFREL--IHVSGVTVTLPNGTRVAITHTGTICITSTLILH 152

Query: 202 DVLFVPDFKFNLISIPKPCRDLNTKVTFTDHKCFLQ 309
           +VL VPDFKFNLIS+    + L+    F    C++Q
Sbjct: 153 NVLLVPDFKFNLISVCCLVKTLSYSAHFFADCCYIQ 188


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/97 (43%), Positives = 59/97 (60%)
 Frame = +1

Query: 28  STWIMDSGATDHMCFDLSMFSEYKTLQNSGNHITIPNGKQVLITHIGIVHLQNDIILQDV 207
           S WI+DSGAT H+C + SMF    +   S N +T+P G ++ IT IG +HL   ++L+ V
Sbjct: 372 SIWILDSGATHHVCTNSSMFHSIHSF--SSNTVTLPTGTKIPITGIGTIHLSPHLVLEHV 429

Query: 208 LFVPDFKFNLISIPKPCRDLNTKVTFTDHKCFLQRSS 318
           L++P F+FNLISI    +       FT H CF+Q  S
Sbjct: 430 LYIPTFQFNLISISALTQTNCFSFDFTAHFCFIQDHS 466


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
           score: 11.19) [Arabidopsis thaliana]
          Length = 1633

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/75 (50%), Positives = 54/75 (72%)
 Frame = +1

Query: 22  TNSTWIMDSGATDHMCFDLSMFSEYKTLQNSGNHITIPNGKQVLITHIGIVHLQNDIILQ 201
           ++  WI+DSGA+ H+C DL+MF E   +  SG  +T+PNG +V ITH G + + + +IL 
Sbjct: 393 SSDAWIIDSGASSHVCSDLTMFREL--IHVSGVTVTLPNGTRVAITHTGTICITSTLILH 450

Query: 202 DVLFVPDFKFNLISI 246
           +VL VPDFKFNLIS+
Sbjct: 451 NVLLVPDFKFNLISV 465


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