BLASTX nr result
ID: Angelica23_contig00045492
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00045492
(318 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI19924.3| unnamed protein product [Vitis vinifera] 125 5e-27
ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi... 125 5e-27
ref|XP_002530092.1| pentatricopeptide repeat-containing protein,... 122 4e-26
ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containi... 115 4e-24
ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|2... 104 9e-21
>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 125 bits (313), Expect = 5e-27
Identities = 62/105 (59%), Positives = 75/105 (71%)
Frame = +1
Query: 1 GFCSNGFVVNALLHMYGNCGNLRSSRVLFYHMGCLRNYYSWNTVLTTLARHKMSEEALII 180
G SN FV NALLHMYG CGNLRS+R+ FY M R+ SWN +LT+ ARH +SEEA+ I
Sbjct: 424 GLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTI 483
Query: 181 FSKMITDSDTKPSNFNCGTVLSVCANISALNTGKEVHGLMVRNGY 315
F +M +T PS F GT+LS CANI AL GK++HG M+RNGY
Sbjct: 484 FGEM--QWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRNGY 526
Score = 65.5 bits (158), Expect = 4e-09
Identities = 35/105 (33%), Positives = 59/105 (56%)
Frame = +1
Query: 1 GFCSNGFVVNALLHMYGNCGNLRSSRVLFYHMGCLRNYYSWNTVLTTLARHKMSEEALII 180
GFC N + ++L+ +YG C + +R +F + N SWN ++ +EA+++
Sbjct: 191 GFCWNVILGSSLVDIYGKCRVMSDARRMFDEIEN-PNAISWNVIVRRYLEMGNEKEAVVM 249
Query: 181 FSKMITDSDTKPSNFNCGTVLSVCANISALNTGKEVHGLMVRNGY 315
F KMI ++ +P NF L C++ISAL G ++HG+ +R GY
Sbjct: 250 FFKMIR-ANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGY 293
Score = 57.8 bits (138), Expect = 9e-07
Identities = 34/99 (34%), Positives = 54/99 (54%)
Frame = +1
Query: 19 FVVNALLHMYGNCGNLRSSRVLFYHMGCLRNYYSWNTVLTTLARHKMSEEALIIFSKMIT 198
F++N + YG C L +R LF M R+ SWN ++T A+ +E+AL +FS+M
Sbjct: 96 FLLNRAIETYGKCSCLDDARELFEEMP-QRDGGSWNAMITAYAQGGCAEKALWLFSRM-N 153
Query: 199 DSDTKPSNFNCGTVLSVCANISALNTGKEVHGLMVRNGY 315
+ +VL CA + AL K++HGL+V+ G+
Sbjct: 154 RLGIWANEITFASVLGSCATVLALFLSKQIHGLIVKYGF 192
>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
[Vitis vinifera]
Length = 711
Score = 125 bits (313), Expect = 5e-27
Identities = 62/105 (59%), Positives = 75/105 (71%)
Frame = +1
Query: 1 GFCSNGFVVNALLHMYGNCGNLRSSRVLFYHMGCLRNYYSWNTVLTTLARHKMSEEALII 180
G SN FV NALLHMYG CGNLRS+R+ FY M R+ SWN +LT+ ARH +SEEA+ I
Sbjct: 424 GLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTI 483
Query: 181 FSKMITDSDTKPSNFNCGTVLSVCANISALNTGKEVHGLMVRNGY 315
F +M +T PS F GT+LS CANI AL GK++HG M+RNGY
Sbjct: 484 FGEM--QWETTPSKFTLGTLLSACANIFALEQGKQIHGFMIRNGY 526
Score = 65.5 bits (158), Expect = 4e-09
Identities = 35/105 (33%), Positives = 59/105 (56%)
Frame = +1
Query: 1 GFCSNGFVVNALLHMYGNCGNLRSSRVLFYHMGCLRNYYSWNTVLTTLARHKMSEEALII 180
GFC N + ++L+ +YG C + +R +F + N SWN ++ +EA+++
Sbjct: 191 GFCWNVILGSSLVDIYGKCRVMSDARRMFDEIEN-PNAISWNVIVRRYLEMGNEKEAVVM 249
Query: 181 FSKMITDSDTKPSNFNCGTVLSVCANISALNTGKEVHGLMVRNGY 315
F KMI ++ +P NF L C++ISAL G ++HG+ +R GY
Sbjct: 250 FFKMIR-ANIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGY 293
Score = 57.8 bits (138), Expect = 9e-07
Identities = 34/99 (34%), Positives = 54/99 (54%)
Frame = +1
Query: 19 FVVNALLHMYGNCGNLRSSRVLFYHMGCLRNYYSWNTVLTTLARHKMSEEALIIFSKMIT 198
F++N + YG C L +R LF M R+ SWN ++T A+ +E+AL +FS+M
Sbjct: 96 FLLNRAIETYGKCSCLDDARELFEEMP-QRDGGSWNAMITAYAQGGCAEKALWLFSRM-N 153
Query: 199 DSDTKPSNFNCGTVLSVCANISALNTGKEVHGLMVRNGY 315
+ +VL CA + AL K++HGL+V+ G+
Sbjct: 154 RLGIWANEITFASVLGSCATVLALFLSKQIHGLIVKYGF 192
>ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530403|gb|EEF32291.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 718
Score = 122 bits (305), Expect = 4e-26
Identities = 61/105 (58%), Positives = 75/105 (71%)
Frame = +1
Query: 1 GFCSNGFVVNALLHMYGNCGNLRSSRVLFYHMGCLRNYYSWNTVLTTLARHKMSEEALII 180
GF S V NALL MYG CGNLRS+RV FY M R+ SWN +LT+ ARH SE+A++I
Sbjct: 421 GFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDNISWNALLTSYARHHQSEQAMMI 480
Query: 181 FSKMITDSDTKPSNFNCGTVLSVCANISALNTGKEVHGLMVRNGY 315
F +M +TKPS F GT+L+ CANI AL+ GKE+HG M+RNGY
Sbjct: 481 FGEM--QWETKPSTFTFGTLLAACANIFALDQGKEIHGFMIRNGY 523
Score = 57.8 bits (138), Expect = 9e-07
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = +1
Query: 1 GFCSNGFVVNALLHMYGNCGNLRSSRVLFYHM-GCLRNYYSWNTVLTTLARHKMSEEALI 177
GFC N + +AL+ +YG C + +R++F + C N +WN ++ EA+
Sbjct: 188 GFCGNVILGSALVDVYGKCKVMSEARLMFNEIENC--NDVTWNVIVRRYLDVGNEREAVK 245
Query: 178 IFSKMITDSDTKPSNFNCGTVLSVCANISALNTGKEVHGLMVR 306
+F KM +D +P NF L C+ + ALN G ++H ++
Sbjct: 246 MFFKMF-QTDVRPLNFTFSNALIACSAMRALNEGMQIHAFAIK 287
>ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
gi|449521874|ref|XP_004167954.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
Length = 697
Score = 115 bits (288), Expect = 4e-24
Identities = 56/105 (53%), Positives = 74/105 (70%)
Frame = +1
Query: 1 GFCSNGFVVNALLHMYGNCGNLRSSRVLFYHMGCLRNYYSWNTVLTTLARHKMSEEALII 180
GF +N ++ NALL MYG CGNL+S++V FY M R+ SWN +LT ARH MSE+A+ I
Sbjct: 423 GFYANLYIGNALLDMYGKCGNLKSAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTI 482
Query: 181 FSKMITDSDTKPSNFNCGTVLSVCANISALNTGKEVHGLMVRNGY 315
FS+M ++D P+NF T+L CAN+ AL GK++HG MVRN Y
Sbjct: 483 FSEMQLETD--PNNFTFATLLGACANMFALEHGKQIHGFMVRNNY 525
Score = 55.8 bits (133), Expect = 4e-06
Identities = 31/104 (29%), Positives = 56/104 (53%)
Frame = +1
Query: 1 GFCSNGFVVNALLHMYGNCGNLRSSRVLFYHMGCLRNYYSWNTVLTTLARHKMSEEALII 180
GF N + ++L+ +YG C + +R +F + RN SWN ++ +EA+ +
Sbjct: 190 GFVGNVILESSLVDVYGKCRLMNDARSMFDEIQN-RNDVSWNVIVRRYLEVGNGKEAVSM 248
Query: 181 FSKMITDSDTKPSNFNCGTVLSVCANISALNTGKEVHGLMVRNG 312
F +M +S PS+F L C+ ++AL G ++HG++V+ G
Sbjct: 249 FFQMFRES-LMPSSFTFSNALIACSRMAALIEGGQIHGIVVKVG 291
>ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|222843933|gb|EEE81480.1|
predicted protein [Populus trichocarpa]
Length = 709
Score = 104 bits (259), Expect = 9e-21
Identities = 53/105 (50%), Positives = 71/105 (67%)
Frame = +1
Query: 1 GFCSNGFVVNALLHMYGNCGNLRSSRVLFYHMGCLRNYYSWNTVLTTLARHKMSEEALII 180
G+ SN + NALL MY CGNLRS+ V F+ M R+ SWN +LT+ AR +MSE+A+ I
Sbjct: 421 GWLSNTVIGNALLDMYCKCGNLRSAGVWFHQMKQSRDSVSWNVLLTSYARRQMSEQAMSI 480
Query: 181 FSKMITDSDTKPSNFNCGTVLSVCANISALNTGKEVHGLMVRNGY 315
F +M +TKP F T+L+ CAN AL+ GK++HG M+RNGY
Sbjct: 481 FREM--QWETKPHKFIFATLLAACANTFALDQGKQIHGFMIRNGY 523
Score = 55.1 bits (131), Expect = 6e-06
Identities = 28/102 (27%), Positives = 53/102 (51%)
Frame = +1
Query: 1 GFCSNGFVVNALLHMYGNCGNLRSSRVLFYHMGCLRNYYSWNTVLTTLARHKMSEEALII 180
GFC N V ++L+ +YG CG + SR +F + N +WN ++ EA+++
Sbjct: 188 GFCGNVIVGSSLVDVYGKCGAMSESRRIFDEIENPNN-VTWNIIVRRYLEVGDENEAVVM 246
Query: 181 FSKMITDSDTKPSNFNCGTVLSVCANISALNTGKEVHGLMVR 306
F KM + +P ++ L C+++ A+ G ++HG+ +
Sbjct: 247 FFKMFR-AKLRPLSYTFSNALVACSDMRAVKEGMQIHGVATK 287