BLASTX nr result

ID: Angelica23_contig00045382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00045382
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsi...    73   2e-11
gb|AAF06091.1|AC007918_15 Contains similarity to gi|4680179 poly...    68   7e-10
dbj|BAB12216.1| vasa homolog [Ciona savignyi]                          65   6e-09
ref|XP_960605.1| hypothetical protein NCU08923 [Neurospora crass...    65   7e-09
gb|ELR05078.1| hypothetical protein GMDG_07120 [Geomyces destruc...    64   1e-08

>gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1611

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
 Frame = +1

Query: 19  DCDTCGRKHAGTCFKGSGKCYKCGQEGHQQMNCPR-----------KGVTCFKCGKEGHI 165
           +C TCG+ H+GTC+K  G C +CG + H   +CP+           +  TCF CGK GH+
Sbjct: 380 ECVTCGKNHSGTCWKAIGACGRCGSKDHAIQSCPKMEPGQSKVLGEETRTCFYCGKTGHL 439

Query: 166 SRDC-KVSTTGPAASRQSGGANSIRPTSRVFNMTLADGLKEMDEMA 300
            R+C K++    A  R + G N + P  +     +A  + E+ E A
Sbjct: 440 KRECPKLTAEKQAGQRDNRGGNGLPPPPK--RQAVASRVYELSEEA 483


>gb|AAF06091.1|AC007918_15 Contains similarity to gi|4680179 polyprotein from Oryza sativa
           subsp. indica Ty3-Gypsy type transposon gb|AF111709 and
           contains 2 PF|00098 Zinc finger, CCHC class domains
           [Arabidopsis thaliana]
          Length = 199

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 24/52 (46%), Positives = 33/52 (63%)
 Frame = +1

Query: 22  CDTCGRKHAGTCFKGSGKCYKCGQEGHQQMNCPRKGVTCFKCGKEGHISRDC 177
           C TCG++H+G C+  +G CY C Q GH   NCP +   C +C K GH +R+C
Sbjct: 139 CATCGKRHSGACWSNTGICYNCRQNGHTWSNCPGRDNNCKRCEKPGHYAREC 190


>dbj|BAB12216.1| vasa homolog [Ciona savignyi]
          Length = 688

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
 Frame = +1

Query: 4   SSPLPDCDTCGRK--------HAGTCFKGSGKCYKCGQEGHQQMNCPR-----KGVTCFK 144
           SS    C  CG +          G   +GSG C+KCG+EGH    CP+     +G  CFK
Sbjct: 102 SSRSKGCFKCGEEGHMSRECPQGGGGGRGSG-CFKCGEEGHMSRECPQGGGGGRGSGCFK 160

Query: 145 CGKEGHISRDCKVSTTGPAASRQSGGANSIRP 240
           CG+EGH+SR+C  +T+G       GG  S RP
Sbjct: 161 CGEEGHMSRECPRNTSG------EGGEKSDRP 186


>ref|XP_960605.1| hypothetical protein NCU08923 [Neurospora crassa OR74A]
           gi|28922111|gb|EAA31369.1| conserved hypothetical
           protein [Neurospora crassa OR74A]
          Length = 183

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/75 (46%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
 Frame = +1

Query: 22  CDTCGRK--HAGTC-FKGSGKCYKCGQEGHQQMNCPR----KGVTCFKCGKEGHISRDCK 180
           C TCG+    A  C  KG+ KCY CG EGH   +CP        TC++CG+ GHISRDC 
Sbjct: 13  CFTCGQTTHQARDCPNKGAAKCYNCGNEGHMSRDCPEGPKDNARTCYRCGQTGHISRDCS 72

Query: 181 VSTTGPAASRQSGGA 225
            S  G     QS GA
Sbjct: 73  QSGGG-----QSSGA 82



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +1

Query: 61  KGSGKCYKCGQEGHQQMNCPRKGVT-CFKCGKEGHISRDC 177
           +G+  C+ CGQ  HQ  +CP KG   C+ CG EGH+SRDC
Sbjct: 8   QGTRACFTCGQTTHQARDCPNKGAAKCYNCGNEGHMSRDC 47


>gb|ELR05078.1| hypothetical protein GMDG_07120 [Geomyces destructans 20631-21]
          Length = 212

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/73 (46%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
 Frame = +1

Query: 22  CDTCGRK--HAGTC-FKGSGKCYKCGQEGHQQMNCPR--KGVTCFKCGKEGHISRDC-KV 183
           C  CG +   A  C  +G  KCY CG EGH    CP   K  TC+KCG+ GHISRDC   
Sbjct: 13  CYNCGDQSHQARDCPTRGPAKCYNCGGEGHMSRECPEGPKDKTCYKCGQPGHISRDCANP 72

Query: 184 STTGPAASRQSGG 222
           +  G  A R  GG
Sbjct: 73  AAEGMGAGRSFGG 85


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