BLASTX nr result

ID: Angelica23_contig00045314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00045314
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi...   127   9e-28
emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]   127   9e-28
ref|XP_002523294.1| pentatricopeptide repeat-containing protein,...   123   1e-26
ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
ref|NP_197146.1| pentatricopeptide repeat-containing protein [Ar...   117   1e-24

>ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
           gi|296089757|emb|CBI39576.3| unnamed protein product
           [Vitis vinifera]
          Length = 586

 Score =  127 bits (319), Expect = 9e-28
 Identities = 56/81 (69%), Positives = 70/81 (86%)
 Frame = -2

Query: 245 FLRIREFGVETSVRSFNTLLNALIQNKQFKLVHLLFKNCKKKFGVVPNVFTCNILLKGFC 66
           FLRI  FG++ SVRSFNTLLN L+QNK+F LVHL+FKNC+KKFG+VPNVFTCNIL+K  C
Sbjct: 193 FLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALC 252

Query: 65  KSDDIEGALKVLDEMPEMGMV 3
           K +DI+ A++VL+EMP MG +
Sbjct: 253 KKNDIDAAIRVLEEMPAMGFI 273


>emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  127 bits (319), Expect = 9e-28
 Identities = 56/81 (69%), Positives = 70/81 (86%)
 Frame = -2

Query: 245 FLRIREFGVETSVRSFNTLLNALIQNKQFKLVHLLFKNCKKKFGVVPNVFTCNILLKGFC 66
           FLRI  FG++ SVRSFNTLLN L+QNK+F LVHL+FKNC+KKFG+VPNVFTCNIL+K  C
Sbjct: 193 FLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALC 252

Query: 65  KSDDIEGALKVLDEMPEMGMV 3
           K +DI+ A++VL+EMP MG +
Sbjct: 253 KKNDIDAAIRVLEEMPAMGFI 273


>ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537382|gb|EEF39010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 544

 Score =  123 bits (309), Expect = 1e-26
 Identities = 53/81 (65%), Positives = 69/81 (85%)
 Frame = -2

Query: 245 FLRIREFGVETSVRSFNTLLNALIQNKQFKLVHLLFKNCKKKFGVVPNVFTCNILLKGFC 66
           F+RI++F V+ SVRS NTLLNA +QNK++ LVH +FKNC+ K+GV+PNVFTCNIL+K  C
Sbjct: 153 FIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALC 212

Query: 65  KSDDIEGALKVLDEMPEMGMV 3
           K +D+E A+KVLDEMP MGM+
Sbjct: 213 KKNDVESAVKVLDEMPAMGMI 233


>ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
           gi|449492939|ref|XP_004159147.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/81 (71%), Positives = 65/81 (80%)
 Frame = -2

Query: 245 FLRIREFGVETSVRSFNTLLNALIQNKQFKLVHLLFKNCKKKFGVVPNVFTCNILLKGFC 66
           FLRI+ FGV  SVRS NTLLNAL+QN +F  VHLLFK  K KFGVVPNVFTCNIL+K  C
Sbjct: 144 FLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALC 203

Query: 65  KSDDIEGALKVLDEMPEMGMV 3
           K +D+EGA KV DEMP MG+V
Sbjct: 204 KKNDVEGARKVFDEMPSMGIV 224


>ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
           gi|9759124|dbj|BAB09609.1| salt-inducible protein-like
           [Arabidopsis thaliana] gi|332004907|gb|AED92290.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 535

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/81 (65%), Positives = 66/81 (81%)
 Frame = -2

Query: 245 FLRIREFGVETSVRSFNTLLNALIQNKQFKLVHLLFKNCKKKFGVVPNVFTCNILLKGFC 66
           FLRI +FGV+ SVRS NTLLN LIQN++F LVH +FKN K+ FG+ PN+FTCN+L+K  C
Sbjct: 143 FLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALC 202

Query: 65  KSDDIEGALKVLDEMPEMGMV 3
           K +DIE A KVLDE+P MG+V
Sbjct: 203 KKNDIESAYKVLDEIPSMGLV 223


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