BLASTX nr result

ID: Angelica23_contig00045289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00045289
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22025.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
ref|XP_002514539.1| pentatricopeptide repeat-containing protein,...   119   3e-25
ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22

>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/94 (67%), Positives = 68/94 (72%)
 Frame = -2

Query: 282 PKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKNLSMGR 103
           P+RNVATWNAMVAGL QFEFNEEG+ LF RM E+GF PDEF LGSVLRGCAG++ L  GR
Sbjct: 145 PERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGR 204

Query: 102 QVHGYXXXXXXXXXXXXXXXLAHMYMKCGDFGEG 1
           QVHGY               LAHMYMKCG  GEG
Sbjct: 205 QVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEG 238



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 28/89 (31%), Positives = 41/89 (46%)
 Frame = -2

Query: 282 PKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKNLSMGR 103
           P +NV  WN ++AG  Q  + EE +  +  M   GF PD+ T  SV+  C+ +  L  G+
Sbjct: 246 PSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQ 305

Query: 102 QVHGYXXXXXXXXXXXXXXXLAHMYMKCG 16
           Q+H                 L  MY +CG
Sbjct: 306 QIHAEVIKAGASLIVSVISSLISMYSRCG 334


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/94 (67%), Positives = 68/94 (72%)
 Frame = -2

Query: 282 PKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKNLSMGR 103
           P+RNVATWNAMVAGL QFEFNEEG+ LF RM E+GF PDEF LGSVLRGCAG++ L  GR
Sbjct: 145 PERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGR 204

Query: 102 QVHGYXXXXXXXXXXXXXXXLAHMYMKCGDFGEG 1
           QVHGY               LAHMYMKCG  GEG
Sbjct: 205 QVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEG 238



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 28/89 (31%), Positives = 41/89 (46%)
 Frame = -2

Query: 282 PKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKNLSMGR 103
           P +NV  WN ++AG  Q  + EE +  +  M   GF PD+ T  SV+  C+ +  L  G+
Sbjct: 246 PSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQ 305

Query: 102 QVHGYXXXXXXXXXXXXXXXLAHMYMKCG 16
           Q+H                 L  MY +CG
Sbjct: 306 QIHAEVIKAGASLIVSVISSLISMYSRCG 334


>ref|XP_002514539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546143|gb|EEF47645.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 332

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/94 (61%), Positives = 67/94 (71%)
 Frame = -2

Query: 282 PKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKNLSMGR 103
           P+RNVATWNA+VAGL QFE NEEG++LF  MYE+GF PDE+TLGSVLRGCAG+K++  GR
Sbjct: 50  PERNVATWNAVVAGLIQFEINEEGLNLFRDMYELGFLPDEYTLGSVLRGCAGLKSMYAGR 109

Query: 102 QVHGYXXXXXXXXXXXXXXXLAHMYMKCGDFGEG 1
           QVH Y               LAHMYMK G   EG
Sbjct: 110 QVHCYVVKCGFEFNLVVGSSLAHMYMKSGSLSEG 143



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/89 (32%), Positives = 44/89 (49%)
 Frame = -2

Query: 282 PKRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKNLSMGR 103
           P RN+  WN ++AG +Q   +EE + L+  M  +GF PD+ T  SV+  C+ +  L  G+
Sbjct: 151 PSRNIVAWNTLIAGKSQNGHSEEVLDLYNMMRIMGFRPDKITFASVISSCSELTTLGQGQ 210

Query: 102 QVHGYXXXXXXXXXXXXXXXLAHMYMKCG 16
           Q+H                 L  MY +CG
Sbjct: 211 QIHAEVIKAGASSVVAVTSSLISMYSRCG 239


>ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|222867440|gb|EEF04571.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/93 (60%), Positives = 64/93 (68%)
 Frame = -2

Query: 279 KRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKNLSMGRQ 100
           +RNVATWNAMV+GL QFEFNE G+ LF  M+E+GF PDEFTLGSVLRGCAG++    G+Q
Sbjct: 51  ERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQ 110

Query: 99  VHGYXXXXXXXXXXXXXXXLAHMYMKCGDFGEG 1
           VH Y               LAHMYMK G  GEG
Sbjct: 111 VHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEG 143


>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
           gi|449526872|ref|XP_004170437.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/93 (54%), Positives = 65/93 (69%)
 Frame = -2

Query: 279 KRNVATWNAMVAGLTQFEFNEEGVSLFCRMYEIGFFPDEFTLGSVLRGCAGMKNLSMGRQ 100
           +RN+ATWNAM+AGLTQFEFN++ +SLF  MY +GF PDEFTLGSVLRGCAG+++L  G++
Sbjct: 156 ERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQE 215

Query: 99  VHGYXXXXXXXXXXXXXXXLAHMYMKCGDFGEG 1
           VH                 LAHMY+K G   +G
Sbjct: 216 VHACLLKCGFELSSVVGSSLAHMYIKSGSLSDG 248


Top