BLASTX nr result

ID: Angelica23_contig00045286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00045286
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263384.1| PREDICTED: uncharacterized protein LOC100245...    87   1e-15
ref|XP_002885604.1| hypothetical protein ARALYDRAFT_342541 [Arab...    75   4e-12
ref|XP_002300157.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcript...    70   2e-10
ref|NP_001154643.1| RNA-directed DNA polymerase (reverse transcr...    70   2e-10

>ref|XP_002263384.1| PREDICTED: uncharacterized protein LOC100245254 [Vitis vinifera]
           gi|298205214|emb|CBI17273.3| unnamed protein product
           [Vitis vinifera]
          Length = 425

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/93 (51%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
 Frame = -1

Query: 276 EVLEYTVSSTSSNGLERVKAGANLD-SEANENQMSSLCANESSQFKILELSNQIEKNESI 100
           EVL+++V   +S GL+R +AGA +D S + E+Q+ S  A+  + F+IL+L+ Q +KN+  
Sbjct: 117 EVLKHSVDFVASQGLKRAEAGALVDYSSSVEDQLDSRTAHGDNNFEILDLNYQTQKNKIT 176

Query: 99  LKSLEDLDRVSNRFDAIENIEDALTGLKVIETE 1
           LKSL+DLD    RF+AIE IEDALTGLKVI+ E
Sbjct: 177 LKSLQDLDYTFKRFEAIEKIEDALTGLKVIDFE 209


>ref|XP_002885604.1| hypothetical protein ARALYDRAFT_342541 [Arabidopsis lyrata subsp.
           lyrata] gi|297331444|gb|EFH61863.1| hypothetical protein
           ARALYDRAFT_342541 [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/90 (45%), Positives = 58/90 (64%)
 Frame = -1

Query: 276 EVLEYTVSSTSSNGLERVKAGANLDSEANENQMSSLCANESSQFKILELSNQIEKNESIL 97
           E L  ++ S SS  +E+ K     +++ + + M     N+  +FK+ EL NQ+E+  SIL
Sbjct: 118 EGLLLSLDSMSSQDVEKSK-----ENQPSSSSMEVCEVNDDDKFKMFELENQMEEKRSIL 172

Query: 96  KSLEDLDRVSNRFDAIENIEDALTGLKVIE 7
           KSLEDLD +  RFDA E +EDALTGLKV+E
Sbjct: 173 KSLEDLDSLRKRFDAAEQVEDALTGLKVLE 202


>ref|XP_002300157.1| predicted protein [Populus trichocarpa] gi|222847415|gb|EEE84962.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/82 (46%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
 Frame = -1

Query: 249 TSSNGLERVKAGANLDS-EANENQMSSLCANESSQFKILELSNQIEKNESILKSLEDLDR 73
           +S    E+ K    ++   + ENQ + +  NE ++F+IL+L NQIE++  ILKS++DLD 
Sbjct: 131 SSQRDREKEKGDEQMEHFSSGENQSNLINTNEENKFEILKLDNQIEESTRILKSMQDLDS 190

Query: 72  VSNRFDAIENIEDALTGLKVIE 7
           V   +DAIE IED L+GLKVIE
Sbjct: 191 VCKWYDAIEQIEDVLSGLKVIE 212


>ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332643359|gb|AEE76880.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 746

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/90 (43%), Positives = 56/90 (62%)
 Frame = -1

Query: 276 EVLEYTVSSTSSNGLERVKAGANLDSEANENQMSSLCANESSQFKILELSNQIEKNESIL 97
           E L  ++ S SS  +E+ K     +++ + + M      +  +FK+ EL NQ+E+   IL
Sbjct: 444 EGLLLSLDSMSSQDVEKSK-----ENQPSSSSMEVCEVIDDDKFKMFELENQMEEKRMIL 498

Query: 96  KSLEDLDRVSNRFDAIENIEDALTGLKVIE 7
           KSLEDLD +  RFDA E +EDALTGLKV+E
Sbjct: 499 KSLEDLDSLRKRFDAAEQVEDALTGLKVLE 528


>ref|NP_001154643.1| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332643360|gb|AEE76881.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 428

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/90 (43%), Positives = 56/90 (62%)
 Frame = -1

Query: 276 EVLEYTVSSTSSNGLERVKAGANLDSEANENQMSSLCANESSQFKILELSNQIEKNESIL 97
           E L  ++ S SS  +E+ K     +++ + + M      +  +FK+ EL NQ+E+   IL
Sbjct: 126 EGLLLSLDSMSSQDVEKSK-----ENQPSSSSMEVCEVIDDDKFKMFELENQMEEKRMIL 180

Query: 96  KSLEDLDRVSNRFDAIENIEDALTGLKVIE 7
           KSLEDLD +  RFDA E +EDALTGLKV+E
Sbjct: 181 KSLEDLDSLRKRFDAAEQVEDALTGLKVLE 210


Top