BLASTX nr result

ID: Angelica23_contig00045113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00045113
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]   145   3e-33
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   138   4e-31
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   136   2e-30
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...   132   3e-29
gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]     128   4e-28

>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/120 (57%), Positives = 88/120 (73%)
 Frame = -3

Query: 363 ISEILQVNKSLQDSHYLGLPSLVGKSKRAVFDFLKDRIWKKIKGWDSKLLSRAGKAVLIK 184
           IS IL V+  L    YLGL SL+GKSKR VF FL+DR+W++++GW SKLLS+AGK +LIK
Sbjct: 136 ISNILGVSTPLNTGRYLGLLSLIGKSKRVVFGFLRDRLWRRLQGWQSKLLSQAGKKILIK 195

Query: 183 SVAQAIPFNTMSCFLLPKTLYEEIQKMLNGFWWRSKSREKKGIHWHSWEAMCMPKSQGGL 4
            V QAIP   MS FLLP +L EE+QKM+N FWW  KS   + I+W SW+ +C+ K +GGL
Sbjct: 196 VVGQAIPSYCMSTFLLPISLSEELQKMMNSFWWGPKSDGGRRINWLSWDKLCLRKEEGGL 255


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/120 (52%), Positives = 89/120 (74%)
 Frame = -3

Query: 363 ISEILQVNKSLQDSHYLGLPSLVGKSKRAVFDFLKDRIWKKIKGWDSKLLSRAGKAVLIK 184
           +S +L V++ +    YLGLPS++G+SK+++F+++KDRIW +I G  SK+LS+AGK VLIK
Sbjct: 327 LSNMLWVSEGIGIRKYLGLPSMIGRSKKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIK 386

Query: 183 SVAQAIPFNTMSCFLLPKTLYEEIQKMLNGFWWRSKSREKKGIHWHSWEAMCMPKSQGGL 4
           SVAQAIP   MS FLLP ++ ++I+KMLN FWW  K+  + GI W SWE + M K  GG+
Sbjct: 387 SVAQAIPSYCMSVFLLPHSIADDIEKMLNSFWWGMKNEGRGGIRWMSWERLTMRKEWGGM 446


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/120 (53%), Positives = 82/120 (68%)
 Frame = -3

Query: 363  ISEILQVNKSLQDSHYLGLPSLVGKSKRAVFDFLKDRIWKKIKGWDSKLLSRAGKAVLIK 184
            I  +L V +  +   YLGLP+++G+SK+  F  +K+RIWKK++GW  KLLSR GK VLIK
Sbjct: 738  IVNVLGVKEVDRQEKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIK 797

Query: 183  SVAQAIPFNTMSCFLLPKTLYEEIQKMLNGFWWRSKSREKKGIHWHSWEAMCMPKSQGGL 4
            SVAQAIP   MS F LP  L +EI  +L  FWW S    +K +HWHSW+ +C PKS GGL
Sbjct: 798  SVAQAIPTYMMSVFSLPSGLIDEIHSLLARFWWGSSDTNRK-MHWHSWDTLCYPKSMGGL 856


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score =  132 bits (332), Expect = 3e-29
 Identities = 61/120 (50%), Positives = 85/120 (70%)
 Frame = -3

Query: 363 ISEILQVNKSLQDSHYLGLPSLVGKSKRAVFDFLKDRIWKKIKGWDSKLLSRAGKAVLIK 184
           I+  L V+ ++    YLGLPS+VG++K A+F +LKDRIWKK + W  + LSRA K VLIK
Sbjct: 266 ITASLGVHNNIGSGKYLGLPSMVGRNKNAIFSYLKDRIWKKCQSWSVRSLSRADKEVLIK 325

Query: 183 SVAQAIPFNTMSCFLLPKTLYEEIQKMLNGFWWRSKSREKKGIHWHSWEAMCMPKSQGGL 4
           SVAQAIP   M  FL+P +L EE+++M+N F+W SK   ++GI+W  W+ + + KS GGL
Sbjct: 326 SVAQAIPSYCMGAFLIPASLCEELERMMNSFYWGSKKNGRRGINWMRWDFLTLHKSLGGL 385


>gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1264

 Score =  128 bits (322), Expect = 4e-28
 Identities = 57/119 (47%), Positives = 81/119 (68%)
 Frame = -3

Query: 363  ISEILQVNKSLQDSHYLGLPSLVGKSKRAVFDFLKDRIWKKIKGWDSKLLSRAGKAVLIK 184
            +   L +N+  ++  YLGLP  +GKS+R  F+++K ++W +I+GW  KLLS+AGK +L+K
Sbjct: 1083 VRSALCINQEAKNERYLGLPVSIGKSRRKAFEYIKRKVWLRIQGWQEKLLSKAGKEILVK 1142

Query: 183  SVAQAIPFNTMSCFLLPKTLYEEIQKMLNGFWWRSKSREKKGIHWHSWEAMCMPKSQGG 7
            +VAQAIP   MSCF L K L +EI  M++ +WW    +E K IHW SWE M +PK  GG
Sbjct: 1143 AVAQAIPTYAMSCFDLTKGLCDEINSMISKWWWSQNDKENK-IHWLSWEKMTLPKKLGG 1200


Top