BLASTX nr result

ID: Angelica23_contig00045001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00045001
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631274.1| PREDICTED: pentatricopeptide repeat-containi...   236   1e-60
emb|CBI28554.3| unnamed protein product [Vitis vinifera]              235   3e-60
emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]   233   1e-59
ref|XP_004161088.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   222   3e-56
ref|XP_004143068.1| PREDICTED: pentatricopeptide repeat-containi...   222   3e-56

>ref|XP_003631274.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
            chloroplastic-like [Vitis vinifera]
          Length = 667

 Score =  236 bits (603), Expect = 1e-60
 Identities = 109/170 (64%), Positives = 141/170 (82%)
 Frame = -3

Query: 538  NGMGMQGLDMLKKMTEKGVRPDKVTFLCVLNGCNHSGLVEEGKMVFDLMKTVFEIHPDRK 359
            NGMG +GL+ML+ M ++G++PD+VTFLC L GC+HSGLVEEG+ VF+ MK++  IHPD++
Sbjct: 497  NGMGREGLEMLEIMAKQGLKPDRVTFLCALTGCSHSGLVEEGRSVFNSMKSIHGIHPDQQ 556

Query: 358  HYSCMVDLFGRAGLLEDAEKLLKQAPRKDDSVLWSSLLRSCRIHRNEDVGRRVTNILMDL 179
            HYSCMVDL GRAGLL++AE LLK AP K DSV+WSSLL+SCRIH +  VGRR   +LM+L
Sbjct: 557  HYSCMVDLLGRAGLLDEAEGLLKHAPAKSDSVMWSSLLQSCRIHGDTIVGRRAAKVLMEL 616

Query: 178  EPEDPEIWLQASNFYAEIGEFETSSHIREVAVARKMRMDIGNSLIETRSH 29
            EPEDP  +LQAS+FY+EIGE E S  IRE+A+AR+M+ ++G+SLIE  SH
Sbjct: 617  EPEDPATYLQASSFYSEIGELEISMQIREIAIARRMKREMGHSLIEVNSH 666


>emb|CBI28554.3| unnamed protein product [Vitis vinifera]
          Length = 1125

 Score =  235 bits (600), Expect = 3e-60
 Identities = 108/170 (63%), Positives = 141/170 (82%)
 Frame = -3

Query: 538  NGMGMQGLDMLKKMTEKGVRPDKVTFLCVLNGCNHSGLVEEGKMVFDLMKTVFEIHPDRK 359
            NGMG +GL+ML+ M ++G++PD+VTFLC L GC+HSGLVEEG+ VF+ MK++  IHPD++
Sbjct: 497  NGMGREGLEMLEIMAKQGLKPDRVTFLCALTGCSHSGLVEEGRSVFNSMKSIHGIHPDQQ 556

Query: 358  HYSCMVDLFGRAGLLEDAEKLLKQAPRKDDSVLWSSLLRSCRIHRNEDVGRRVTNILMDL 179
            HYSCMVDL GRAGLL++AE LLK AP K DSV+WSSLL+SCRIH +  VGRR   +LM+L
Sbjct: 557  HYSCMVDLLGRAGLLDEAEGLLKHAPAKSDSVMWSSLLQSCRIHGDTIVGRRAAKVLMEL 616

Query: 178  EPEDPEIWLQASNFYAEIGEFETSSHIREVAVARKMRMDIGNSLIETRSH 29
            EPEDP  +LQAS+FY+EIGE E S  IRE+A+AR+M+ ++G+SLIE  +H
Sbjct: 617  EPEDPATYLQASSFYSEIGELEISMQIREIAIARRMKREMGHSLIEVNTH 666


>emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]
          Length = 1052

 Score =  233 bits (595), Expect = 1e-59
 Identities = 108/170 (63%), Positives = 140/170 (82%)
 Frame = -3

Query: 538 NGMGMQGLDMLKKMTEKGVRPDKVTFLCVLNGCNHSGLVEEGKMVFDLMKTVFEIHPDRK 359
           NGMG +GL+ML+ M ++G++PD+VTFLC L GC+HSGLVEEG+ VF+ MK++  IHPD++
Sbjct: 486 NGMGREGLEMLEIMAKQGLKPDRVTFLCALTGCSHSGLVEEGRSVFNSMKSIHGIHPDQQ 545

Query: 358 HYSCMVDLFGRAGLLEDAEKLLKQAPRKDDSVLWSSLLRSCRIHRNEDVGRRVTNILMDL 179
           HYSCMVDL GRAGLL++AE LLK AP K DSV+WSSLL+SCRIH +  VGRR   +LM+L
Sbjct: 546 HYSCMVDLLGRAGLLDEAEGLLKHAPAKSDSVMWSSLLQSCRIHGDTIVGRRAAKVLMEL 605

Query: 178 EPEDPEIWLQASNFYAEIGEFETSSHIREVAVARKMRMDIGNSLIETRSH 29
           E EDP  +LQAS+FY+EIGE E S  IRE+A+AR+M+ ++G+SLIE  SH
Sbjct: 606 EXEDPATYLQASSFYSEIGELEISMQIREIAIARRMKREMGHSLIEVNSH 655


>ref|XP_004161088.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g13600-like [Cucumis sativus]
          Length = 618

 Score =  222 bits (565), Expect = 3e-56
 Identities = 98/156 (62%), Positives = 132/156 (84%)
 Frame = -3

Query: 538 NGMGMQGLDMLKKMTEKGVRPDKVTFLCVLNGCNHSGLVEEGKMVFDLMKTVFEIHPDRK 359
           NG+G +G+++LK M ++G++PDKVTFLC L GCNHSGLVEEG+ VF+LMKT++ I PD K
Sbjct: 338 NGLGKEGVEILKMMIQRGLKPDKVTFLCALIGCNHSGLVEEGRFVFELMKTLYGIEPDWK 397

Query: 358 HYSCMVDLFGRAGLLEDAEKLLKQAPRKDDSVLWSSLLRSCRIHRNEDVGRRVTNILMDL 179
           HYSCMVDL GRAGLL++AEKL+++ P K + V+WSS+LRSCR+HRNE +GR++   L+DL
Sbjct: 398 HYSCMVDLLGRAGLLDEAEKLIQKVPEKVNGVIWSSMLRSCRVHRNETIGRKIVKWLVDL 457

Query: 178 EPEDPEIWLQASNFYAEIGEFETSSHIREVAVARKM 71
           E EDP I LQASNFY++IG+FETS  +RE+A+ +K+
Sbjct: 458 EAEDPAILLQASNFYSDIGDFETSKQLREIALTKKV 493


>ref|XP_004143068.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 812

 Score =  222 bits (565), Expect = 3e-56
 Identities = 98/156 (62%), Positives = 132/156 (84%)
 Frame = -3

Query: 538 NGMGMQGLDMLKKMTEKGVRPDKVTFLCVLNGCNHSGLVEEGKMVFDLMKTVFEIHPDRK 359
           NG+G +G+++LK M ++G++PDKVTFLC L GCNHSGLVEEG+ VF+LMKT++ I PD K
Sbjct: 496 NGLGKEGVEILKMMIQRGLKPDKVTFLCALIGCNHSGLVEEGRFVFELMKTLYGIEPDWK 555

Query: 358 HYSCMVDLFGRAGLLEDAEKLLKQAPRKDDSVLWSSLLRSCRIHRNEDVGRRVTNILMDL 179
           HYSCMVDL GRAGLL++AEKL+++ P K + V+WSS+LRSCR+HRNE +GR++   L+DL
Sbjct: 556 HYSCMVDLLGRAGLLDEAEKLIQKVPEKVNGVIWSSMLRSCRVHRNETIGRKIVKWLVDL 615

Query: 178 EPEDPEIWLQASNFYAEIGEFETSSHIREVAVARKM 71
           E EDP I LQASNFY++IG+FETS  +RE+A+ +K+
Sbjct: 616 EAEDPAILLQASNFYSDIGDFETSKQLREIALTKKV 651


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