BLASTX nr result

ID: Angelica23_contig00044935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044935
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]    59   4e-07
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...    58   9e-07
ref|XP_003609609.1| Pentatricopeptide repeat-containing protein ...    57   1e-06
ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06
ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06

>emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
          Length = 841

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/63 (39%), Positives = 46/63 (73%)
 Frame = +2

Query: 197 VSALLEKTLTVKQIKQIQALVLINGLNYVERLLVHRLLDSSCSYNRDTSKYIQLILHHMQ 376
           +S L   +L+VKQ KQ+ AL+LI+GL+++E +L  ++L S+ +Y+   ++Y+  +LHH +
Sbjct: 3   ISKLSTISLSVKQAKQVHALILIHGLSHLEPILARQILJSASNYSATVAQYVHSVLHHSK 62

Query: 377 NPD 385
           +PD
Sbjct: 63  SPD 65


>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/62 (40%), Positives = 45/62 (72%)
 Frame = +2

Query: 200 SALLEKTLTVKQIKQIQALVLINGLNYVERLLVHRLLDSSCSYNRDTSKYIQLILHHMQN 379
           S L   +L+VKQ KQ+ AL+LI+GL+++E +L  ++L S+ +Y+   ++Y+  +LHH ++
Sbjct: 8   SKLSTISLSVKQAKQVHALILIHGLSHLEPILARQILISASNYSATVAQYVHSVLHHSKS 67

Query: 380 PD 385
           PD
Sbjct: 68  PD 69


>ref|XP_003609609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510664|gb|AES91806.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 576

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/64 (40%), Positives = 41/64 (64%)
 Frame = +2

Query: 194 KVSALLEKTLTVKQIKQIQALVLINGLNYVERLLVHRLLDSSCSYNRDTSKYIQLILHHM 373
           K++ L++K  TVK  KQI A ++ N L ++E + +HR+L    +  +  S YI  ILHH+
Sbjct: 5   KLTTLMKKCSTVKHAKQIHAQIITNNLTHLEPIFIHRILLCDITNYKTISNYILSILHHL 64

Query: 374 QNPD 385
           +NPD
Sbjct: 65  RNPD 68


>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/62 (40%), Positives = 45/62 (72%)
 Frame = +2

Query: 200 SALLEKTLTVKQIKQIQALVLINGLNYVERLLVHRLLDSSCSYNRDTSKYIQLILHHMQN 379
           S L   +L+VKQ KQ+ AL+LI+GL+++E +L  ++L S+ +Y+   ++Y+  +LHH ++
Sbjct: 8   SKLSTISLSVKQAKQVHALILIHGLSHLEPILARQILLSASNYSATVAQYVHSVLHHSKS 67

Query: 380 PD 385
           PD
Sbjct: 68  PD 69


>ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Glycine max]
          Length = 576

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/64 (42%), Positives = 39/64 (60%)
 Frame = +2

Query: 194 KVSALLEKTLTVKQIKQIQALVLINGLNYVERLLVHRLLDSSCSYNRDTSKYIQLILHHM 373
           K+  L++K  TVKQ KQI A +LING  ++  LL+HR+L    +  R  + Y   +LHH+
Sbjct: 5   KLITLMKKCSTVKQAKQIHAHILINGFTFLRPLLIHRMLLWDVTNYRTMANYAYSMLHHL 64

Query: 374 QNPD 385
             PD
Sbjct: 65  HIPD 68


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