BLASTX nr result
ID: Angelica23_contig00044782
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00044782
(267 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi... 93 1e-24
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi... 94 4e-24
emb|CBI30711.3| unnamed protein product [Vitis vinifera] 94 4e-24
ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|2... 94 3e-23
ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containi... 88 4e-23
>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 93.2 bits (230), Expect(2) = 1e-24
Identities = 39/56 (69%), Positives = 51/56 (91%)
Frame = +2
Query: 92 ENLVSWTIMTAGYGMHGFGRQAVSTFSEMRRSGIKPDNASFLSILYACSHSGLLDE 259
++LVSWT+M AGYGMHG+G +A++TF++MR +GI+PD SF+SILYACSHSGLLDE
Sbjct: 618 KDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDE 673
Score = 45.1 bits (105), Expect(2) = 1e-24
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +3
Query: 3 DLFVMNALLDMYVKCGALVLARSLFNIMQEK 95
D +V NA++DMYVKCG LVLARSLF+++ K
Sbjct: 588 DKYVTNAVVDMYVKCGLLVLARSLFDMIPNK 618
Score = 44.7 bits (104), Expect(2) = 6e-06
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +2
Query: 92 ENLVSWTIMTAGYGMHGFGRQAVSTFSEMRRSGIKPDNASFLSILYACSHSGLL 253
+ +VSWT M GY G A+ F EM+ G+ PD + SIL AC+ +G L
Sbjct: 417 KTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNL 470
Score = 30.0 bits (66), Expect(2) = 6e-06
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 18 NALLDMYVKCGALVLARSLFNIMQEK 95
N LLDMY KCG L A +F M EK
Sbjct: 392 NTLLDMYSKCGDLNSAIRVFERMDEK 417
>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 94.0 bits (232), Expect(2) = 4e-24
Identities = 40/56 (71%), Positives = 50/56 (89%)
Frame = +2
Query: 92 ENLVSWTIMTAGYGMHGFGRQAVSTFSEMRRSGIKPDNASFLSILYACSHSGLLDE 259
++LVSWT+M AGYGMHG+G +A++ F+EMR SGI+PD SF+SILYACSHSGLLDE
Sbjct: 516 KDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDE 571
Score = 42.4 bits (98), Expect(2) = 4e-24
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 3 DLFVMNALLDMYVKCGALVLARSLFNIMQEK 95
D V NAL+DMY+KCGAL LAR LF+++ EK
Sbjct: 486 DRHVANALVDMYLKCGALGLARLLFDMIPEK 516
Score = 41.2 bits (95), Expect(2) = 2e-06
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 3 DLFVMNALLDMYVKCGALVLARSLFNIMQEK 95
DLFV NAL+DMY KCG++ A S+F+ MQ K
Sbjct: 386 DLFVSNALMDMYAKCGSMGDAHSVFSEMQVK 416
Score = 35.0 bits (79), Expect(2) = 2e-06
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +2
Query: 92 ENLVSWTIMTAGYGMHGFGRQAVSTFSEMRRSGIKPDNASFLSILYACSHSGLLD 256
+++VSW M GY + +A++ F EM+ + KP++ + IL AC+ L+
Sbjct: 416 KDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALE 469
>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 94.0 bits (232), Expect(2) = 4e-24
Identities = 40/56 (71%), Positives = 50/56 (89%)
Frame = +2
Query: 92 ENLVSWTIMTAGYGMHGFGRQAVSTFSEMRRSGIKPDNASFLSILYACSHSGLLDE 259
++LVSWT+M AGYGMHG+G +A++ F+EMR SGI+PD SF+SILYACSHSGLLDE
Sbjct: 389 KDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDE 444
Score = 42.4 bits (98), Expect(2) = 4e-24
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 3 DLFVMNALLDMYVKCGALVLARSLFNIMQEK 95
D V NAL+DMY+KCGAL LAR LF+++ EK
Sbjct: 359 DRHVANALVDMYLKCGALGLARLLFDMIPEK 389
>ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|222848697|gb|EEE86244.1|
predicted protein [Populus trichocarpa]
Length = 571
Score = 94.4 bits (233), Expect(2) = 3e-23
Identities = 39/56 (69%), Positives = 51/56 (91%)
Frame = +2
Query: 92 ENLVSWTIMTAGYGMHGFGRQAVSTFSEMRRSGIKPDNASFLSILYACSHSGLLDE 259
++L++WT+M AGYGMHGFG A++TF+EMR++GI+PD SF+SILYACSHSGLLDE
Sbjct: 263 KDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDE 318
Score = 38.9 bits (89), Expect(2) = 3e-23
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 3 DLFVMNALLDMYVKCGALVLARSLFNIMQEK 95
D V NAL+DMYVKCG VLAR LF+++ K
Sbjct: 233 DQQVANALVDMYVKCGVPVLARLLFDMIPTK 263
Score = 46.6 bits (109), Expect(2) = 4e-06
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +2
Query: 98 LVSWTIMTAGYGMHGFGRQAVSTFSEMRRSGIKPDNASFLSILYACSHSGLLD 256
+V+WT + A Y G +A+ F EM R G+ PD + ++L+AC+ +G L+
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLE 116
Score = 28.9 bits (63), Expect(2) = 4e-06
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 18 NALLDMYVKCGALVLARSLFNIM 86
N LLDMY KCG L A +F++M
Sbjct: 37 NTLLDMYAKCGVLDGAILVFDLM 59
>ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 87.8 bits (216), Expect(2) = 4e-23
Identities = 40/58 (68%), Positives = 47/58 (81%)
Frame = +2
Query: 86 AGENLVSWTIMTAGYGMHGFGRQAVSTFSEMRRSGIKPDNASFLSILYACSHSGLLDE 259
+ +NL+SWTIM AGYGMHG GR A++ F +MR SGI PD ASF +ILYACSHSGL DE
Sbjct: 560 SNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDE 617
Score = 45.1 bits (105), Expect(2) = 4e-23
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +3
Query: 3 DLFVMNALLDMYVKCGALVLARSLFNIMQEK 95
D FV NAL+DMYVKCGAL+LAR LF+ + K
Sbjct: 532 DDFVANALIDMYVKCGALLLARRLFDRLSNK 562