BLASTX nr result

ID: Angelica23_contig00044756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044756
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat...   108   3e-22
ref|XP_003614047.1| hypothetical protein MTR_5g044120 [Medicago ...   107   1e-21
ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat...   105   5e-21
ref|XP_002893401.1| pentatricopeptide repeat-containing protein ...   103   2e-20
ref|NP_173972.1| pentatricopeptide repeat-containing protein [Ar...   102   3e-20

>ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Cucumis sativus]
          Length = 505

 Score =  108 bits (271), Expect = 3e-22
 Identities = 48/73 (65%), Positives = 55/73 (75%)
 Frame = -1

Query: 219 PARVNSDHLLRVCTILYQQQNSPVSKLHSSLTHSNFQLSHEFFLQVCNNFPFSWNPVFKF 40
           P  ++S HL RVCT+LYQQQNSP  KLH+ L   NF LSHEFFLQVCN FP SW PV++F
Sbjct: 39  PQPIDSTHLRRVCTVLYQQQNSPDLKLHTKLLACNFNLSHEFFLQVCNTFPLSWRPVYRF 98

Query: 39  FHFTLLNPNFQHT 1
           F FT  +PNF HT
Sbjct: 99  FQFTETHPNFTHT 111


>ref|XP_003614047.1| hypothetical protein MTR_5g044120 [Medicago truncatula]
           gi|355515382|gb|AES97005.1| hypothetical protein
           MTR_5g044120 [Medicago truncatula]
          Length = 507

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/72 (69%), Positives = 58/72 (80%), Gaps = 2/72 (2%)
 Frame = -1

Query: 210 VNSDHLLRVCTILYQQQNSPVSKLHSSLTHSNFQLSHEFFLQVCNNFPFSWNPVFKFFHF 31
           VN + LL+VCTILYQQQNSP S+LHS LT SNF L+HEFFLQVCNNFP+SW PV++FF F
Sbjct: 32  VNREELLKVCTILYQQQNSPDSRLHSKLTSSNFNLTHEFFLQVCNNFPYSWRPVYRFFLF 91

Query: 30  TL--LNPNFQHT 1
           T    N +F HT
Sbjct: 92  TQQEKNSSFTHT 103


>ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Glycine max]
          Length = 494

 Score =  105 bits (261), Expect = 5e-21
 Identities = 47/70 (67%), Positives = 55/70 (78%)
 Frame = -1

Query: 210 VNSDHLLRVCTILYQQQNSPVSKLHSSLTHSNFQLSHEFFLQVCNNFPFSWNPVFKFFHF 31
           VN DHLLRVCTILYQQQNSP  +L S L  S FQL+HEFFLQVCN FP+SW PV++FF +
Sbjct: 31  VNPDHLLRVCTILYQQQNSPEPRLTSKLASSEFQLTHEFFLQVCNKFPYSWRPVYRFFLY 90

Query: 30  TLLNPNFQHT 1
           T   P+F H+
Sbjct: 91  TQSLPHFTHS 100


>ref|XP_002893401.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339243|gb|EFH69660.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 500

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/71 (66%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
 Frame = -1

Query: 210 VNSDHLLRVCTILYQQQNSPVSKLHSSLTHSNFQLSHEFFLQVCNNFPFSWNPVFKFFHF 31
           +N DHLLRVCTILYQQQNSP S+L S L+ + FQL+HEFFLQVCNNFP SW PV +FF +
Sbjct: 41  INQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHRFFLY 100

Query: 30  TLL-NPNFQHT 1
           + + +P+F HT
Sbjct: 101 SQIHHPDFVHT 111


>ref|NP_173972.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75263259|sp|Q9FZD4.1|PPR59_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g26500 gi|9797751|gb|AAF98569.1|AC013427_12
           Contains similarity to a hypothetical protein T12C14_170
           gi|7340718 from Arabidopsis thaliana BAC T12C14
           gb|AL162507 and contains multiple PPR PF|01535 repeats
           [Arabidopsis thaliana] gi|332192576|gb|AEE30697.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 505

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/71 (66%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
 Frame = -1

Query: 210 VNSDHLLRVCTILYQQQNSPVSKLHSSLTHSNFQLSHEFFLQVCNNFPFSWNPVFKFFHF 31
           +N DHLLRVCTILYQQQNSP S+L S L+ + FQL+HEFFLQVCNNFP SW PV +FF +
Sbjct: 41  INQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRPVHRFFLY 100

Query: 30  TLL-NPNFQHT 1
           +   +P+F HT
Sbjct: 101 SQTHHPDFTHT 111


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