BLASTX nr result

ID: Angelica23_contig00044666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044666
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containi...    68   9e-10
ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
emb|CBI28459.3| unnamed protein product [Vitis vinifera]               55   8e-06

>ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
            mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/83 (40%), Positives = 50/83 (60%)
 Frame = +1

Query: 4    EFVEVIPLLDSIGKQGLMLSFATCKTVVHGLYNSKYENEVARVLKSMVKFGWVPHSTSLA 183
            EF EV+ LL+ IG+ G  L   TC  +  G   +   +E A VL+SMVKFGWV ++TSL 
Sbjct: 929  EFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLG 988

Query: 184  DLISEHKKDLVSGDVRHVSEQVA 252
            DL+  ++    S D  ++ +Q+A
Sbjct: 989  DLVDGNQNGANSEDSDNLLKQMA 1011


>ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|222868744|gb|EEF05875.1|
            predicted protein [Populus trichocarpa]
          Length = 1041

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +1

Query: 13   EVIPLLDSIGKQGLMLSFATCKTVVHGLYNSKYENEVARVLKSMVKFGWVPHSTSLADLI 192
            EV+ +L+ I +QGL LS ATC T+V   + +   +  ARVLKSMV+F WVP ST L DLI
Sbjct: 953  EVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012

Query: 193  SEHKKDLVSGDVRHVSEQVAY 255
            +  +    S +     +Q+A+
Sbjct: 1013 NVEQDSTDSENAGDFLKQMAW 1033


>ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
            mitochondrial-like [Cucumis sativus]
          Length = 999

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/68 (45%), Positives = 42/68 (61%)
 Frame = +1

Query: 16   VIPLLDSIGKQGLMLSFATCKTVVHGLYNSKYENEVARVLKSMVKFGWVPHSTSLADLIS 195
            V+ LL  +GK+ L LS  TC T++ G Y S  E+E ++VL  M + GWVP S SL D IS
Sbjct: 926  VLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIS 985

Query: 196  EHKKDLVS 219
              + D+ S
Sbjct: 986  TGRDDMKS 993


>ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
            mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/68 (45%), Positives = 42/68 (61%)
 Frame = +1

Query: 16   VIPLLDSIGKQGLMLSFATCKTVVHGLYNSKYENEVARVLKSMVKFGWVPHSTSLADLIS 195
            V+ LL  +GK+ L LS  TC T++ G Y S  E+E ++VL  M + GWVP S SL D IS
Sbjct: 959  VLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIS 1018

Query: 196  EHKKDLVS 219
              + D+ S
Sbjct: 1019 TGRDDMKS 1026


>emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
 Frame = +1

Query: 1    GEFVEVIPLLDSI------GKQGLMLSFATCKTVVHGLYNSKYENEVARVLKSMVKFGWV 162
            G  +E   L D I       K G  L   TC  +  G   +   +E A VL+SMVKFGWV
Sbjct: 884  GNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWV 943

Query: 163  PHSTSLADLISEHKKDLVSGDVRHVSEQVA 252
             ++TSL DL+  ++    S D  ++ +Q+A
Sbjct: 944  SNTTSLGDLVDGNQNGANSEDSDNLLKQMA 973


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