BLASTX nr result

ID: Angelica23_contig00044623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044623
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624600.1| RNA-binding protein [Medicago truncatula] gi...    77   1e-12
ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti...    77   1e-12
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...    73   2e-11
emb|CBI36673.3| unnamed protein product [Vitis vinifera]               73   2e-11
ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu...    69   5e-10

>ref|XP_003624600.1| RNA-binding protein [Medicago truncatula]
           gi|355499615|gb|AES80818.1| RNA-binding protein
           [Medicago truncatula]
          Length = 492

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/60 (61%), Positives = 45/60 (75%)
 Frame = +1

Query: 274 YGYQGVAEVQPMQKAVEEGVATLLIRHLPEAIPNDTLHRLFSYYGASSVRACTSGRLRNC 453
           +G+QG  E  P      E  ATLLI+HLP+AIP+DTL RL S+YGASSVR C++GRLRNC
Sbjct: 9   FGFQGTTEPNP---CTVESPATLLIKHLPDAIPHDTLSRLLSHYGASSVRPCSAGRLRNC 65


>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
           gi|298205172|emb|CBI17231.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/44 (84%), Positives = 38/44 (86%)
 Frame = +1

Query: 322 EEGVATLLIRHLPEAIPNDTLHRLFSYYGASSVRACTSGRLRNC 453
           E+  ATLLIRHLPEAIP DTL RLFS YGASSVR CTSGRLRNC
Sbjct: 17  EKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPCTSGRLRNC 60


>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
           vinifera]
          Length = 463

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/44 (81%), Positives = 37/44 (84%)
 Frame = +1

Query: 322 EEGVATLLIRHLPEAIPNDTLHRLFSYYGASSVRACTSGRLRNC 453
           E+  ATLLIRHLPEAIP DTL RLFS YGASSVR  TSGRLRNC
Sbjct: 17  EKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPSTSGRLRNC 60


>emb|CBI36673.3| unnamed protein product [Vitis vinifera]
          Length = 190

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/44 (81%), Positives = 37/44 (84%)
 Frame = +1

Query: 322 EEGVATLLIRHLPEAIPNDTLHRLFSYYGASSVRACTSGRLRNC 453
           E+  ATLLIRHLPEAIP DTL RLFS YGASSVR  TSGRLRNC
Sbjct: 17  EKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPSTSGRLRNC 60


>ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis]
           gi|223535277|gb|EEF36954.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 450

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = +1

Query: 331 VATLLIRHLPEAIPNDTLHRLFSYYGASSVRACTSGRLRNC 453
           V+TLLIRHLPEAIP++TL RLFS+YGA+SVR C  GRL NC
Sbjct: 8   VSTLLIRHLPEAIPHETLSRLFSHYGATSVRPCAGGRLTNC 48


Top