BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044611
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865693.1| pentatricopeptide repeat-containing protein ...   123   2e-26
ref|NP_199702.1| pentatricopeptide repeat-containing protein [Ar...   119   3e-25
ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-21

>ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311528|gb|EFH41952.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 640

 Score =  123 bits (308), Expect = 2e-26
 Identities = 63/113 (55%), Positives = 79/113 (69%), Gaps = 6/113 (5%)
 Frame = +3

Query: 6   DDGYSLQALNVFCLMLENEFVGPNKFTFPSVLKACANVGFIEVGKQVHGMIQKYGIERDE 185
           D+  +L A+ +FC M+ +EF+ PN+FTFPSVLKACA  G I+ GKQ+HG+  KYG   DE
Sbjct: 97  DEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIHGLALKYGFGGDE 156

Query: 186 FVLSNLVRMYVVCGEMGDAFVLFKGNVCRS------DRKKMNTGNVVSWNVMI 326
           FV+SNLVRMYV+CG M DA VLF  N+         DR+K + G VV WNVMI
Sbjct: 157 FVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRD-GEVVLWNVMI 208



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/106 (31%), Positives = 57/106 (53%)
 Frame = +3

Query: 9   DGYSLQALNVFCLMLENEFVGPNKFTFPSVLKACANVGFIEVGKQVHGMIQKYGIERDEF 188
           +G+   A+ VF  M + E + PN  T  SVL A + +G +E+G+ +H   +  GI  D+ 
Sbjct: 245 NGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDV 304

Query: 189 VLSNLVRMYVVCGEMGDAFVLFKGNVCRSDRKKMNTGNVVSWNVMI 326
           + S L+ MY  CG +  A ++F         +++   NV++W+ MI
Sbjct: 305 LGSALIDMYSKCGIIEKAIMVF---------ERLPRENVITWSAMI 341


>ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g48910 gi|10177180|dbj|BAB10314.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|15810559|gb|AAL07167.1| putative selenium-binding
           protein [Arabidopsis thaliana]
           gi|332008359|gb|AED95742.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 646

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/112 (53%), Positives = 76/112 (67%), Gaps = 5/112 (4%)
 Frame = +3

Query: 6   DDGYSLQALNVFCLMLENEFVGPNKFTFPSVLKACANVGFIEVGKQVHGMIQKYGIERDE 185
           D+  +L A+ +F  M+ +EFV PN+FTFPSVLKACA  G I+ GKQ+HG+  KYG   DE
Sbjct: 104 DEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDE 163

Query: 186 FVLSNLVRMYVVCGEMGDAFVLFKGNVCRSDR-----KKMNTGNVVSWNVMI 326
           FV+SNLVRMYV+CG M DA VLF  N+   D      ++   G +V WNVMI
Sbjct: 164 FVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215


>ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  109 bits (272), Expect = 3e-22
 Identities = 58/114 (50%), Positives = 72/114 (63%), Gaps = 7/114 (6%)
 Frame = +3

Query: 6   DDGYSLQALNVFCLMLENEFVGPNKFTFPSVLKACANVGFIEVGKQVHGMIQKYGIERDE 185
           D+    +AL +F  ML +  V PN+FTFPSVLKACA    +  GKQ+HG+I K+G   DE
Sbjct: 98  DEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDE 157

Query: 186 FVLSNLVRMYVVCGEMGDAFVLFKGNVCRSD-------RKKMNTGNVVSWNVMI 326
           FV+SNLVRMYV+C  M DA+ LF  NV   D        K+   GNVV WN+MI
Sbjct: 158 FVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMI 211



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/106 (31%), Positives = 57/106 (53%)
 Frame = +3

Query: 9   DGYSLQALNVFCLMLENEFVGPNKFTFPSVLKACANVGFIEVGKQVHGMIQKYGIERDEF 188
           +G+ ++A+N+F  M ++  + PN  T  SVL A A +G +E+GK +H    K  +E D+ 
Sbjct: 248 NGHFIEAINLFQEM-QSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDV 306

Query: 189 VLSNLVRMYVVCGEMGDAFVLFKGNVCRSDRKKMNTGNVVSWNVMI 326
           + S LV MY  CG +  A  +F         + +   N ++W+ +I
Sbjct: 307 LGSALVDMYSKCGSIDKALQVF---------ETLPKRNAITWSAII 343


>ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  109 bits (272), Expect = 3e-22
 Identities = 58/114 (50%), Positives = 72/114 (63%), Gaps = 7/114 (6%)
 Frame = +3

Query: 6   DDGYSLQALNVFCLMLENEFVGPNKFTFPSVLKACANVGFIEVGKQVHGMIQKYGIERDE 185
           D+    +AL +F  ML +  V PN+FTFPSVLKACA    +  GKQ+HG+I K+G   DE
Sbjct: 98  DEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDE 157

Query: 186 FVLSNLVRMYVVCGEMGDAFVLFKGNVCRSD-------RKKMNTGNVVSWNVMI 326
           FV+SNLVRMYV+C  M DA+ LF  NV   D        K+   GNVV WN+MI
Sbjct: 158 FVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMI 211



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/106 (32%), Positives = 58/106 (54%)
 Frame = +3

Query: 9   DGYSLQALNVFCLMLENEFVGPNKFTFPSVLKACANVGFIEVGKQVHGMIQKYGIERDEF 188
           +G+ ++A+N+F  M ++  + PN  T  SVL A A +G +E+GK +H    K  IE D+ 
Sbjct: 248 NGHFIEAINLFQEM-QSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDV 306

Query: 189 VLSNLVRMYVVCGEMGDAFVLFKGNVCRSDRKKMNTGNVVSWNVMI 326
           + S LV MY  CG + +A  +F         + +   N ++W+ +I
Sbjct: 307 LGSALVDMYSKCGSIDEALQVF---------ETLPKRNAITWSAII 343


>ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|222861374|gb|EEE98916.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score =  104 bits (259), Expect = 9e-21
 Identities = 58/103 (56%), Positives = 67/103 (65%)
 Frame = +3

Query: 18  SLQALNVFCLMLENEFVGPNKFTFPSVLKACANVGFIEVGKQVHGMIQKYGIERDEFVLS 197
           SL+AL  F  ML +  V PNKFTFP VLKACA +  IE GKQ+HG + K G+  DEFV S
Sbjct: 103 SLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRS 162

Query: 198 NLVRMYVVCGEMGDAFVLFKGNVCRSDRKKMNTGNVVSWNVMI 326
           NLVR+YV+CG M DA VLF         +    GNVV WNVMI
Sbjct: 163 NLVRVYVMCGAMKDAHVLF--------YQTRLEGNVVLWNVMI 197