BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044589
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpe|CAI56329.1| TPA: ubiquitin-60S ribosomal L40 fusion protein ...   131   5e-29
ref|XP_002273568.1| PREDICTED: ubiquitin-60S ribosomal protein L...   131   7e-29
ref|NP_565836.1| 60S ribosomal protein L40-2 [Arabidopsis thalia...   129   2e-28
sp|P51423.2|RL40_BRARA RecName: Full=Ubiquitin-60S ribosomal pro...   129   2e-28
ref|XP_004156525.1| PREDICTED: ubiquitin-60S ribosomal protein L...   129   3e-28

>tpe|CAI56329.1| TPA: ubiquitin-60S ribosomal L40 fusion protein [Vitis vinifera]
          Length = 128

 Score =  131 bits (330), Expect = 5e-29
 Identities = 66/112 (58%), Positives = 80/112 (71%)
 Frame = -3

Query: 376 DTIQHLKSLVQPKVCVPVNQQRFIFAGKQLDDSLAVADYGICNEATLHLASRLVGGKGGT 197
           DTI ++K+ +Q K  +P +QQR IFAGKQL+D   +ADY I  E+TLHL  RL GG    
Sbjct: 21  DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVRRLRGG---- 76

Query: 196 QHYRSTDPKLVQLAKKFNQFKLICRNCYARLHPRAKNFRKKKCGHSNQHRPK 41
                 +P L+QLA+K+NQ K+ICR CYARLHPRA N RKKKCGHSNQ RPK
Sbjct: 77  ----IIEPSLMQLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124


>ref|XP_002273568.1| PREDICTED: ubiquitin-60S ribosomal protein L40-2 [Vitis vinifera]
           gi|302143958|emb|CBI23063.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  131 bits (329), Expect = 7e-29
 Identities = 66/112 (58%), Positives = 80/112 (71%)
 Frame = -3

Query: 376 DTIQHLKSLVQPKVCVPVNQQRFIFAGKQLDDSLAVADYGICNEATLHLASRLVGGKGGT 197
           DTI ++K+ +Q K  +P +QQR IFAGKQL+D   +ADY I  E+TLHL  RL GG    
Sbjct: 21  DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG---- 76

Query: 196 QHYRSTDPKLVQLAKKFNQFKLICRNCYARLHPRAKNFRKKKCGHSNQHRPK 41
                 +P L+QLA+K+NQ K+ICR CYARLHPRA N RKKKCGHSNQ RPK
Sbjct: 77  ----IIEPSLMQLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124


>ref|NP_565836.1| 60S ribosomal protein L40-2 [Arabidopsis thaliana]
           gi|18409639|ref|NP_566969.1| 60S ribosomal protein L40-2
           [Arabidopsis thaliana]
           gi|302425250|sp|Q42202.2|RL40B_ARATH RecName:
           Full=Ubiquitin-60S ribosomal protein L40-2; AltName:
           Full=Protein EARLY-RESPONSIVE TO DEHYDRATION 16;
           AltName: Full=Protein EMBRYO DEFECTIVE 2167; AltName:
           Full=Protein HAPLESS 4; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=60S ribosomal
           protein L40-2; AltName: Full=CEP52; Flags: Precursor
           gi|302595860|sp|B9DHA6.1|RL40A_ARATH RecName:
           Full=Ubiquitin-60S ribosomal protein L40-1; Contains:
           RecName: Full=Ubiquitin; Contains: RecName: Full=60S
           ribosomal protein L40-1; AltName: Full=CEP52; Flags:
           Precursor gi|13430798|gb|AAK26021.1|AF360311_1 putative
           ubiquitin extension protein UBQ2 [Arabidopsis thaliana]
           gi|166930|gb|AAA32904.1| ubiquitin extension protein
           (UBQ1) [Arabidopsis thaliana] gi|166932|gb|AAA32905.1|
           ubiquitin extension protein (UBQ2) [Arabidopsis
           thaliana] gi|4886268|emb|CAB43405.1| ubiquitin /
           ribosomal protein CEP52 [Arabidopsis thaliana]
           gi|14334950|gb|AAK59652.1| putative ubiquitin extension
           protein UBQ1 [Arabidopsis thaliana]
           gi|15810643|gb|AAL07246.1| putative ubiquitin extension
           protein UBQ2 [Arabidopsis thaliana]
           gi|16323384|gb|AAL15186.1| putative ubiquitin extension
           protein UBQ1 [Arabidopsis thaliana]
           gi|20198116|gb|AAM15407.1| ubiquitin extension protein
           (UBQ2) [Arabidopsis thaliana] gi|21553955|gb|AAM63036.1|
           ubiquitin extension protein UBQ1 [Arabidopsis thaliana]
           gi|222424333|dbj|BAH20123.1| AT2G36170 [Arabidopsis
           thaliana] gi|330254118|gb|AEC09212.1| 60S ribosomal
           protein L40-2 [Arabidopsis thaliana]
           gi|332645445|gb|AEE78966.1| 60S ribosomal protein L40-2
           [Arabidopsis thaliana]
          Length = 128

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/112 (58%), Positives = 79/112 (70%)
 Frame = -3

Query: 376 DTIQHLKSLVQPKVCVPVNQQRFIFAGKQLDDSLAVADYGICNEATLHLASRLVGGKGGT 197
           DTI ++K+ +Q K  +P +QQR IFAGKQL+D   +ADY I  E+TLHL  RL GG    
Sbjct: 21  DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG---- 76

Query: 196 QHYRSTDPKLVQLAKKFNQFKLICRNCYARLHPRAKNFRKKKCGHSNQHRPK 41
                 +P L+ LA+K+NQ K+ICR CYARLHPRA N RKKKCGHSNQ RPK
Sbjct: 77  ----IIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124


>sp|P51423.2|RL40_BRARA RecName: Full=Ubiquitin-60S ribosomal protein L40; Contains:
           RecName: Full=Ubiquitin; Contains: RecName: Full=60S
           ribosomal protein L40; AltName: Full=CEP52; Flags:
           Precursor gi|347064|gb|AAA33014.1| ubiquitin/ribosomal
           protein [Brassica rapa] gi|395079|emb|CAA80863.1|
           ubiquitin/ribosomal protein [Brassica rapa]
          Length = 128

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/112 (58%), Positives = 79/112 (70%)
 Frame = -3

Query: 376 DTIQHLKSLVQPKVCVPVNQQRFIFAGKQLDDSLAVADYGICNEATLHLASRLVGGKGGT 197
           DTI ++K+ +Q K  +P +QQR IFAGKQL+D   +ADY I  E+TLHL  RL GG    
Sbjct: 21  DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG---- 76

Query: 196 QHYRSTDPKLVQLAKKFNQFKLICRNCYARLHPRAKNFRKKKCGHSNQHRPK 41
                 +P L+ LA+K+NQ K+ICR CYARLHPRA N RKKKCGHSNQ RPK
Sbjct: 77  ----IIEPSLMALARKYNQAKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 124


>ref|XP_004156525.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Cucumis
           sativus]
          Length = 208

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/112 (58%), Positives = 79/112 (70%)
 Frame = -3

Query: 376 DTIQHLKSLVQPKVCVPVNQQRFIFAGKQLDDSLAVADYGICNEATLHLASRLVGGKGGT 197
           DTI ++K+ +Q K  +P +QQR IFAGKQL+D   +ADY I  E+TLHL  RL GG    
Sbjct: 101 DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG---- 156

Query: 196 QHYRSTDPKLVQLAKKFNQFKLICRNCYARLHPRAKNFRKKKCGHSNQHRPK 41
                 +P L+ LA+K+NQ K+ICR CYARLHPRA N RKKKCGHSNQ RPK
Sbjct: 157 ----IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPK 204



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = -3

Query: 376 DTIQHLKSLVQPKVCVPVNQQRFIFAGKQLDDSLAVADYGICNEATLHLASRLVGG 209
           DTI ++K+ +Q K  +P +QQR IFAGKQL+D   +ADY I  E+TLHL  RL GG
Sbjct: 21  DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76