BLASTX nr result

ID: Angelica23_contig00044556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044556
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15409.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002273351.1| PREDICTED: transcription initiation factor T...   117   1e-24
ref|XP_002273382.1| PREDICTED: transcription initiation factor T...   117   1e-24
emb|CAN81006.1| hypothetical protein VITISV_011581 [Vitis vinifera]   117   1e-24
ref|XP_002321457.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20

>emb|CBI15409.3| unnamed protein product [Vitis vinifera]
          Length = 1245

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = -1

Query: 250 VVRHQKLCLSIDMDKRRIYGYTELEVIVPDNGIVGLHADNLVIETVKVDGEVAEFEVFPH 71
           VVRHQKLCLSID+DKRRIYGYTELE+ VPD GIVGLHA+NLVIE+V VDGE  EFE +PH
Sbjct: 23  VVRHQKLCLSIDIDKRRIYGYTELEIAVPDIGIVGLHAENLVIESVSVDGEPTEFEFYPH 82

Query: 70  YLHLDSDNRW 41
           + H +S+ RW
Sbjct: 83  HQHTESEKRW 92


>ref|XP_002273351.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 1 [Vitis vinifera]
          Length = 1325

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = -1

Query: 250 VVRHQKLCLSIDMDKRRIYGYTELEVIVPDNGIVGLHADNLVIETVKVDGEVAEFEVFPH 71
           VVRHQKLCLSID+DKRRIYGYTELE+ VPD GIVGLHA+NLVIE+V VDGE  EFE +PH
Sbjct: 23  VVRHQKLCLSIDIDKRRIYGYTELEIAVPDIGIVGLHAENLVIESVSVDGEPTEFEFYPH 82

Query: 70  YLHLDSDNRW 41
           + H +S+ RW
Sbjct: 83  HQHTESEKRW 92


>ref|XP_002273382.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 2 [Vitis vinifera]
          Length = 1345

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = -1

Query: 250 VVRHQKLCLSIDMDKRRIYGYTELEVIVPDNGIVGLHADNLVIETVKVDGEVAEFEVFPH 71
           VVRHQKLCLSID+DKRRIYGYTELE+ VPD GIVGLHA+NLVIE+V VDGE  EFE +PH
Sbjct: 23  VVRHQKLCLSIDIDKRRIYGYTELEIAVPDIGIVGLHAENLVIESVSVDGEPTEFEFYPH 82

Query: 70  YLHLDSDNRW 41
           + H +S+ RW
Sbjct: 83  HQHTESEKRW 92


>emb|CAN81006.1| hypothetical protein VITISV_011581 [Vitis vinifera]
          Length = 257

 Score =  117 bits (292), Expect = 1e-24
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = -1

Query: 250 VVRHQKLCLSIDMDKRRIYGYTELEVIVPDNGIVGLHADNLVIETVKVDGEVAEFEVFPH 71
           VVRHQKLCLSID+DKRRIYGYTELE+ VPD GIVGLHA+NLVIE+V VDGE  EFE +PH
Sbjct: 23  VVRHQKLCLSIDIDKRRIYGYTELEIAVPDIGIVGLHAENLVIESVSVDGEPTEFEFYPH 82

Query: 70  YLHLDSDNRW 41
           + H +S+ RW
Sbjct: 83  HQHTESEKRW 92


>ref|XP_002321457.1| predicted protein [Populus trichocarpa] gi|222868453|gb|EEF05584.1|
           predicted protein [Populus trichocarpa]
          Length = 1359

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/71 (67%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
 Frame = -1

Query: 250 VVRHQKLCLSIDMDKRRIYGYTELEVIVPDNGIVGLHADNLVIETVKVDGEVAEFEVFPH 71
           VVRHQKLCLSID+DK +IYGYTELE+ VPD GIVGLHA+NL IE+V VDGE  E+E +PH
Sbjct: 20  VVRHQKLCLSIDIDKHQIYGYTELEIAVPDIGIVGLHAENLGIESVFVDGEATEYEYYPH 79

Query: 70  -YLHLDSDNRW 41
              ++D + RW
Sbjct: 80  QQQNVDGEKRW 90


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