BLASTX nr result
ID: Angelica23_contig00044516
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica23_contig00044516
(305 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containi... 154 9e-36
emb|CBI36234.3| unnamed protein product [Vitis vinifera] 154 9e-36
ref|XP_002890108.1| pentatricopeptide repeat-containing protein ... 152 4e-35
ref|XP_002517553.1| pentatricopeptide repeat-containing protein,... 150 1e-34
ref|NP_173004.1| pentatricopeptide repeat-containing protein [Ar... 146 1e-33
>ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 154 bits (388), Expect = 9e-36
Identities = 71/99 (71%), Positives = 86/99 (86%)
Frame = -1
Query: 302 FFRNMQVILKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYVR 123
FF+ M + LKPNS+TL+SVLSACAR+GAL CGKE+HA ALR GL FDGF NALLDMYVR
Sbjct: 485 FFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVR 544
Query: 122 CGKINLAWNQFNTQKRDLASWNILLTGYAQRGQGALAVD 6
CG++ AWNQFN+ ++D+ASWNILLTGYAQ+G+G LAV+
Sbjct: 545 CGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVE 583
Score = 57.4 bits (137), Expect = 1e-06
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = -1
Query: 305 IFFRNMQVILKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYV 126
++ R + V ++P+ T VL C + L G+E+H +R G D NAL+ MYV
Sbjct: 182 LYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241
Query: 125 RCGKINLAWNQFNTQ-KRDLASWNILLTGY 39
+CG I A F+ +RD SWN +++GY
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGY 271
Score = 57.4 bits (137), Expect = 1e-06
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = -1
Query: 305 IFFRNMQVILKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYV 126
+FF + + P+ +T+ SV+SAC +G G+E+H ++ G V + N+L+ M+
Sbjct: 283 LFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHS 342
Query: 125 RCGKINLAWNQFNTQK-RDLASWNILLTGYAQRGQGALAVD 6
G + A F+ + +DL SW +++GY + G AV+
Sbjct: 343 SVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVE 383
>emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 154 bits (388), Expect = 9e-36
Identities = 71/99 (71%), Positives = 86/99 (86%)
Frame = -1
Query: 302 FFRNMQVILKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYVR 123
FF+ M + LKPNS+TL+SVLSACAR+GAL CGKE+HA ALR GL FDGF NALLDMYVR
Sbjct: 485 FFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVR 544
Query: 122 CGKINLAWNQFNTQKRDLASWNILLTGYAQRGQGALAVD 6
CG++ AWNQFN+ ++D+ASWNILLTGYAQ+G+G LAV+
Sbjct: 545 CGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVE 583
Score = 57.4 bits (137), Expect = 1e-06
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = -1
Query: 305 IFFRNMQVILKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYV 126
++ R + V ++P+ T VL C + L G+E+H +R G D NAL+ MYV
Sbjct: 182 LYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241
Query: 125 RCGKINLAWNQFNTQ-KRDLASWNILLTGY 39
+CG I A F+ +RD SWN +++GY
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGY 271
Score = 57.4 bits (137), Expect = 1e-06
Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Frame = -1
Query: 305 IFFRNMQVILKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYV 126
+FF + + P+ +T+ SV+SAC +G G+E+H ++ G V + N+L+ M+
Sbjct: 283 LFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHS 342
Query: 125 RCGKINLAWNQFNTQK-RDLASWNILLTGYAQRGQGALAVD 6
G + A F+ + +DL SW +++GY + G AV+
Sbjct: 343 SVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVE 383
>ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335950|gb|EFH66367.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 866
Score = 152 bits (383), Expect = 4e-35
Identities = 66/100 (66%), Positives = 87/100 (87%)
Frame = -1
Query: 305 IFFRNMQVILKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYV 126
IFFR M++ L+PN+ITL + L+ACAR+GALMCGKE+HA LR G+ D F NALLDMYV
Sbjct: 485 IFFRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 125 RCGKINLAWNQFNTQKRDLASWNILLTGYAQRGQGALAVD 6
RCG++N+AWNQFN+QK+D++SWNILLTGY++RGQG++ V+
Sbjct: 545 RCGRMNIAWNQFNSQKKDVSSWNILLTGYSERGQGSVVVE 584
Score = 63.2 bits (152), Expect = 2e-08
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = -1
Query: 278 LKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYVRCGKINLAW 99
+KP+ T VL C + L G+E+H +R G D NAL+ MYV+CG + A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 98 NQFNTQ-KRDLASWNILLTGYAQRGQG 21
F+ +RD+ SWN +++GY + G G
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMG 278
Score = 54.7 bits (130), Expect = 8e-06
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = -1
Query: 278 LKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYVRCGKINLAW 99
+KP+ IT+ +VLSACA +G L G E+H A++ L+ N L++MY +C I+ A
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 98 NQF-NTQKRDLASWNILLTG 42
+ F N ++++ SW ++ G
Sbjct: 454 DIFHNIPRKNVISWTSIIAG 473
>ref|XP_002517553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543185|gb|EEF44717.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 653
Score = 150 bits (378), Expect = 1e-34
Identities = 69/99 (69%), Positives = 85/99 (85%)
Frame = -1
Query: 302 FFRNMQVILKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYVR 123
FFR M+ LKPNSITLISVLSACAR+GALMCGKE+HA AL+ +V++GF NA+LDMYVR
Sbjct: 493 FFRKMKRNLKPNSITLISVLSACARIGALMCGKEIHAHALKTAMVYEGFLPNAILDMYVR 552
Query: 122 CGKINLAWNQFNTQKRDLASWNILLTGYAQRGQGALAVD 6
CGK+ LA NQFN K D+A+WNIL+ GYA++GQGA+AV+
Sbjct: 553 CGKLGLALNQFNLYKEDVAAWNILMRGYAEQGQGAMAVE 591
Score = 63.5 bits (153), Expect = 2e-08
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = -1
Query: 305 IFFRNMQVILKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYV 126
++ R + V +KP+ T VL +C + GKE+H +R G D NAL+ MYV
Sbjct: 190 LYHRMLWVGIKPDIYTFPCVLRSCGGANDFIRGKEIHCHVIRFGFETDVSAVNALITMYV 249
Query: 125 RCGKINLAWNQFNTQ-KRDLASWNILLTGYAQRGQ 24
+CG + A F+ +RD SWN +++GY + G+
Sbjct: 250 KCGCVGSARTVFDKMLQRDRISWNAMISGYFENGE 284
Score = 57.4 bits (137), Expect = 1e-06
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Frame = -1
Query: 299 FRNMQVI-LKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYVR 123
++NM++ + P+ IT+ VLSACA +G L G +H A R GL+ N+L+DMY +
Sbjct: 393 YKNMELAGIVPDEITIACVLSACASLGQLDLGMRLHELANRMGLMSFVIVANSLIDMYSK 452
Query: 122 CGKINLAWNQFN-TQKRDLASWNILLTGYAQRGQGALAVDF 3
C I+ A F+ Q +++ SW ++ G + A+ F
Sbjct: 453 CKCIDKALEVFHCIQDKNVISWTSIILGLRINNRSFEALSF 493
>ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein
[Arabidopsis thaliana] gi|300825685|gb|ADK35876.1|
chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 146 bits (369), Expect = 1e-33
Identities = 64/100 (64%), Positives = 84/100 (84%)
Frame = -1
Query: 305 IFFRNMQVILKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYV 126
IF R M++ L+PN+ITL + L+ACAR+GALMCGKE+HA LR G+ D F NALLDMYV
Sbjct: 485 IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544
Query: 125 RCGKINLAWNQFNTQKRDLASWNILLTGYAQRGQGALAVD 6
RCG++N AW+QFN+QK+D+ SWNILLTGY++RGQG++ V+
Sbjct: 545 RCGRMNTAWSQFNSQKKDVTSWNILLTGYSERGQGSMVVE 584
Score = 62.0 bits (149), Expect = 5e-08
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = -1
Query: 278 LKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYVRCGKINLAW 99
+KP+ T VL C + L GKE+H +R G D NAL+ MYV+CG + A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 98 NQFNTQ-KRDLASWNILLTGYAQRG 27
F+ +RD+ SWN +++GY + G
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENG 276
Score = 55.8 bits (133), Expect = 3e-06
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = -1
Query: 305 IFFRNMQVILKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYV 126
+FF + + P+ +TL SV+SAC +G G+++HA + G D N+L MY+
Sbjct: 284 LFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYL 343
Query: 125 RCGKINLAWNQFN-TQKRDLASWNILLTGY 39
G A F+ +++D+ SW +++GY
Sbjct: 344 NAGSWREAEKLFSRMERKDIVSWTTMISGY 373
Score = 54.7 bits (130), Expect = 8e-06
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = -1
Query: 278 LKPNSITLISVLSACARVGALMCGKEMHAQALRNGLVFDGFFQNALLDMYVRCGKINLAW 99
+KP+ IT+ +VLSACA +G L G E+H A++ L+ N L++MY +C I+ A
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKAL 453
Query: 98 NQF-NTQKRDLASWNILLTG 42
+ F N ++++ SW ++ G
Sbjct: 454 DIFHNIPRKNVISWTSIIAG 473