BLASTX nr result

ID: Angelica23_contig00044498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044498
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20322.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_002527601.1| pentatricopeptide repeat-containing protein,...    84   2e-14
ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...    82   5e-14
emb|CBI33242.3| unnamed protein product [Vitis vinifera]               82   5e-14

>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/78 (53%), Positives = 56/78 (71%)
 Frame = -1

Query: 236 LLQRIILLKDPGVSIVPVLDQWIKEGYTIKPPDLQRLIRTLRSRKRYSHALQLSEWGSTN 57
           L  RI  L  P +S+VPVLDQW++EG  ++  +L R+IR LRSRKRY+ AL++SEW S+ 
Sbjct: 39  LYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSK 98

Query: 56  NFCSDSSASHAVQLDLIG 3
             C  S ++ AVQLDLIG
Sbjct: 99  ELCPFSPSARAVQLDLIG 116


>ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial [Vitis vinifera]
          Length = 504

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/78 (53%), Positives = 56/78 (71%)
 Frame = -1

Query: 236 LLQRIILLKDPGVSIVPVLDQWIKEGYTIKPPDLQRLIRTLRSRKRYSHALQLSEWGSTN 57
           L  RI  L  P +S+VPVLDQW++EG  ++  +L R+IR LRSRKRY+ AL++SEW S+ 
Sbjct: 39  LYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSK 98

Query: 56  NFCSDSSASHAVQLDLIG 3
             C  S ++ AVQLDLIG
Sbjct: 99  ELCPFSPSARAVQLDLIG 116


>ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533018|gb|EEF34782.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 502

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/87 (49%), Positives = 56/87 (64%)
 Frame = -1

Query: 263 NSLWKGSNRLLQRIILLKDPGVSIVPVLDQWIKEGYTIKPPDLQRLIRTLRSRKRYSHAL 84
           N     SN L  RI  L +P +S+VPVLD W++EG  I+  +LQ++IR LR  +RY+ AL
Sbjct: 28  NKARTASNTLFARISPLGEPDISLVPVLDNWVQEGKKIRGFELQKIIRDLRCHRRYTQAL 87

Query: 83  QLSEWGSTNNFCSDSSASHAVQLDLIG 3
           Q+SEW +       S A HAVQLDLIG
Sbjct: 88  QVSEWMNGKGQSGFSPADHAVQLDLIG 114


>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Vitis vinifera]
          Length = 506

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 40/82 (48%), Positives = 51/82 (62%)
 Frame = -1

Query: 248 GSNRLLQRIILLKDPGVSIVPVLDQWIKEGYTIKPPDLQRLIRTLRSRKRYSHALQLSEW 69
           G   L  +I  L DP  S+VP LD W++ G  +   +LQR+I  LR RKR+S AL++SEW
Sbjct: 37  GKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEW 96

Query: 68  GSTNNFCSDSSASHAVQLDLIG 3
            S    C+ S   HAVQLDLIG
Sbjct: 97  MSKKGICAFSPTEHAVQLDLIG 118


>emb|CBI33242.3| unnamed protein product [Vitis vinifera]
          Length = 335

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 40/82 (48%), Positives = 51/82 (62%)
 Frame = -1

Query: 248 GSNRLLQRIILLKDPGVSIVPVLDQWIKEGYTIKPPDLQRLIRTLRSRKRYSHALQLSEW 69
           G   L  +I  L DP  S+VP LD W++ G  +   +LQR+I  LR RKR+S AL++SEW
Sbjct: 37  GKISLYNKISPLGDPNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEW 96

Query: 68  GSTNNFCSDSSASHAVQLDLIG 3
            S    C+ S   HAVQLDLIG
Sbjct: 97  MSKKGICAFSPTEHAVQLDLIG 118


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