BLASTX nr result

ID: Angelica23_contig00044488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044488
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]    80   1e-13
ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002511274.1| replication factor C / DNA polymerase III ga...    68   7e-10

>emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]
          Length = 1057

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 48/115 (41%), Positives = 67/115 (58%)
 Frame = -3

Query: 360 TNQEESCESTLLSEKYYREYKNKKLSLIGKTPIEDCSEETGSCNETLEGSLQAERLDQNA 181
           T +EE+ +   LSE+Y    +   L L+  TP  +  E   SCN  + GS  AER D  A
Sbjct: 217 TIKEEAYDKKSLSERYCSGLRENGLDLMNITPSSNGLEGADSCNGPILGSSHAERTDHXA 276

Query: 180 SKRNSRYKSRIRSSRVGTGDVMSRTGSPCLSMGDVPVEKSSHSPSLYDNADVDAV 16
           SK  S+YK++++S   G GDV+S  GSPC S+ DV +E SS S SL  N + +A+
Sbjct: 277 SKWKSQYKNQLKSF-TGLGDVVSCVGSPCPSLSDVLLEGSSRSTSLLANEESNAI 330


>ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|222858771|gb|EEE96318.1|
           predicted protein [Populus trichocarpa]
          Length = 965

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/116 (36%), Positives = 66/116 (56%)
 Frame = -3

Query: 354 QEESCESTLLSEKYYREYKNKKLSLIGKTPIEDCSEETGSCNETLEGSLQAERLDQNASK 175
           + E+  + LLSE+Y   ++NK L L+  TP+ +  E+  S +  + GS      D +  +
Sbjct: 129 EREASGTKLLSEEYCGSHRNKVLDLVCTTPLSNQLEDRDSTSGPITGSPLGS--DHSVPR 186

Query: 174 RNSRYKSRIRSSRVGTGDVMSRTGSPCLSMGDVPVEKSSHSPSLYDNADVDAVYLN 7
           +  R K++++S   G GDV+SR GSPCLS+ D     SSHS SL+ N + D +  N
Sbjct: 187 QKPRSKNQVKSYS-GVGDVLSRAGSPCLSVSDA---LSSHSTSLFANEETDFMVQN 238


>ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223550389|gb|EEF51876.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1025

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/116 (37%), Positives = 65/116 (56%)
 Frame = -3

Query: 354 QEESCESTLLSEKYYREYKNKKLSLIGKTPIEDCSEETGSCNETLEGSLQAERLDQNASK 175
           QE+      LSE+YY  +++K L L   TP+ +      S NE +  S + E  DQ+ S+
Sbjct: 131 QEDVSGKKSLSERYYINHRDKGLELTCITPLSNAE----SNNELILRSPKVECFDQSISR 186

Query: 174 RNSRYKSRIRSSRVGTGDVMSRTGSPCLSMGDVPVEKSSHSPSLYDNADVDAVYLN 7
           + S+YK+  +SS +  GD++SR GSPCLS+ D     SS+  SL  N D D +  N
Sbjct: 187 KKSQYKNHDKSSGM-VGDILSRVGSPCLSVSDA---LSSYGVSLLANEDTDFMVQN 238


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