BLASTX nr result
ID: Angelica23_contig00044488
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica23_contig00044488 (419 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera] 80 1e-13 ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|2... 69 3e-10 ref|XP_002511274.1| replication factor C / DNA polymerase III ga... 68 7e-10 >emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera] Length = 1057 Score = 80.5 bits (197), Expect = 1e-13 Identities = 48/115 (41%), Positives = 67/115 (58%) Frame = -3 Query: 360 TNQEESCESTLLSEKYYREYKNKKLSLIGKTPIEDCSEETGSCNETLEGSLQAERLDQNA 181 T +EE+ + LSE+Y + L L+ TP + E SCN + GS AER D A Sbjct: 217 TIKEEAYDKKSLSERYCSGLRENGLDLMNITPSSNGLEGADSCNGPILGSSHAERTDHXA 276 Query: 180 SKRNSRYKSRIRSSRVGTGDVMSRTGSPCLSMGDVPVEKSSHSPSLYDNADVDAV 16 SK S+YK++++S G GDV+S GSPC S+ DV +E SS S SL N + +A+ Sbjct: 277 SKWKSQYKNQLKSF-TGLGDVVSCVGSPCPSLSDVLLEGSSRSTSLLANEESNAI 330 >ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|222858771|gb|EEE96318.1| predicted protein [Populus trichocarpa] Length = 965 Score = 69.3 bits (168), Expect = 3e-10 Identities = 42/116 (36%), Positives = 66/116 (56%) Frame = -3 Query: 354 QEESCESTLLSEKYYREYKNKKLSLIGKTPIEDCSEETGSCNETLEGSLQAERLDQNASK 175 + E+ + LLSE+Y ++NK L L+ TP+ + E+ S + + GS D + + Sbjct: 129 EREASGTKLLSEEYCGSHRNKVLDLVCTTPLSNQLEDRDSTSGPITGSPLGS--DHSVPR 186 Query: 174 RNSRYKSRIRSSRVGTGDVMSRTGSPCLSMGDVPVEKSSHSPSLYDNADVDAVYLN 7 + R K++++S G GDV+SR GSPCLS+ D SSHS SL+ N + D + N Sbjct: 187 QKPRSKNQVKSYS-GVGDVLSRAGSPCLSVSDA---LSSHSTSLFANEETDFMVQN 238 >ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis] gi|223550389|gb|EEF51876.1| replication factor C / DNA polymerase III gamma-tau subunit, putative [Ricinus communis] Length = 1025 Score = 68.2 bits (165), Expect = 7e-10 Identities = 44/116 (37%), Positives = 65/116 (56%) Frame = -3 Query: 354 QEESCESTLLSEKYYREYKNKKLSLIGKTPIEDCSEETGSCNETLEGSLQAERLDQNASK 175 QE+ LSE+YY +++K L L TP+ + S NE + S + E DQ+ S+ Sbjct: 131 QEDVSGKKSLSERYYINHRDKGLELTCITPLSNAE----SNNELILRSPKVECFDQSISR 186 Query: 174 RNSRYKSRIRSSRVGTGDVMSRTGSPCLSMGDVPVEKSSHSPSLYDNADVDAVYLN 7 + S+YK+ +SS + GD++SR GSPCLS+ D SS+ SL N D D + N Sbjct: 187 KKSQYKNHDKSSGM-VGDILSRVGSPCLSVSDA---LSSYGVSLLANEDTDFMVQN 238