BLASTX nr result

ID: Angelica23_contig00044432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044432
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containi...    96   2e-18
ref|XP_002534359.1| pentatricopeptide repeat-containing protein,...    96   2e-18
ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi...    96   3e-18
ref|XP_003546072.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17
ref|XP_002883590.1| hypothetical protein ARALYDRAFT_899142 [Arab...    94   1e-17

>ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
           gi|449516331|ref|XP_004165200.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
          Length = 393

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/78 (57%), Positives = 56/78 (71%)
 Frame = -3

Query: 235 CDGNVQLFNSVIKFCCGRKFLFNRAFDVYKKMWRSENAKPSLETYXXXXXXXXXXXXXXN 56
           C+ +V L+NSVI+FCC RK  FNRAFDVYKKMW+S++ KP+LETY              +
Sbjct: 153 CEMSVPLYNSVIRFCCARKCRFNRAFDVYKKMWKSDDCKPTLETYAMLFNSLLRRFNKLS 212

Query: 55  VSYGYLHSVRSMNKQMKA 2
           VSY YLHSVRS+ KQMK+
Sbjct: 213 VSYVYLHSVRSLTKQMKS 230


>ref|XP_002534359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525434|gb|EEF28024.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 382

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/78 (58%), Positives = 57/78 (73%)
 Frame = -3

Query: 235 CDGNVQLFNSVIKFCCGRKFLFNRAFDVYKKMWRSENAKPSLETYXXXXXXXXXXXXXXN 56
           C+ NVQL+NS+I+FCCGRK LFNRAFDVYKKM +S++ KP+LETY              N
Sbjct: 142 CEMNVQLYNSMIRFCCGRKLLFNRAFDVYKKMLQSDDCKPTLETYTLLLNSLLRRFNKLN 201

Query: 55  VSYGYLHSVRSMNKQMKA 2
           V Y YLH+V+S+ KQMKA
Sbjct: 202 VCYVYLHAVKSLTKQMKA 219


>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/77 (59%), Positives = 53/77 (68%)
 Frame = -3

Query: 235 CDGNVQLFNSVIKFCCGRKFLFNRAFDVYKKMWRSENAKPSLETYXXXXXXXXXXXXXXN 56
           C  +V L+NS+I+FCCGRKFLFNRAFDVYKKM  SE+ KPSLETY               
Sbjct: 153 CSVSVPLYNSIIRFCCGRKFLFNRAFDVYKKMLNSEDCKPSLETYTLLLNALLRKFNKLT 212

Query: 55  VSYGYLHSVRSMNKQMK 5
           V Y YLH+VRS+ KQMK
Sbjct: 213 VCYVYLHAVRSLTKQMK 229


>ref|XP_003546072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Glycine max]
          Length = 372

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/77 (58%), Positives = 54/77 (70%)
 Frame = -3

Query: 232 DGNVQLFNSVIKFCCGRKFLFNRAFDVYKKMWRSENAKPSLETYXXXXXXXXXXXXXXNV 53
           D ++ L+NS+I+FCCGRKFLFNRAFDVYKKM  S + KP+LETY              NV
Sbjct: 133 DASIPLYNSIIRFCCGRKFLFNRAFDVYKKMLNSRDCKPNLETYSLLFNSLLRRFNKLNV 192

Query: 52  SYGYLHSVRSMNKQMKA 2
            Y YLH+VRS+ KQMKA
Sbjct: 193 CYVYLHAVRSLTKQMKA 209


>ref|XP_002883590.1| hypothetical protein ARALYDRAFT_899142 [Arabidopsis lyrata subsp.
           lyrata] gi|297329430|gb|EFH59849.1| hypothetical protein
           ARALYDRAFT_899142 [Arabidopsis lyrata subsp. lyrata]
          Length = 379

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/78 (57%), Positives = 55/78 (70%)
 Frame = -3

Query: 235 CDGNVQLFNSVIKFCCGRKFLFNRAFDVYKKMWRSENAKPSLETYXXXXXXXXXXXXXXN 56
           C+ +V L+N +I+FCCGRKFLFNRAFDVY KM RSE++KP LETY              N
Sbjct: 139 CEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSEDSKPDLETYTLLLSSLLKRFNKLN 198

Query: 55  VSYGYLHSVRSMNKQMKA 2
           V Y YLH+VRS+ KQMK+
Sbjct: 199 VCYVYLHAVRSLTKQMKS 216


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