BLASTX nr result

ID: Angelica23_contig00044332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044332
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]   182   2e-44
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   177   8e-43
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...   172   2e-41
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   171   6e-41
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...   168   4e-40

>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score =  182 bits (462), Expect = 2e-44
 Identities = 90/167 (53%), Positives = 124/167 (74%)
 Frame = -3

Query: 507  ITQKITDDHNLLLMAPIEANEVRKALFQMHPDKSPGPDGFNPGFYQKYWDIVGKDVVNLV 328
            I+  I+ + N  L  P    EV+ ALF MHPDKSPG DGF+PGFYQ++W+IVG+DV N  
Sbjct: 704  ISPVISVEQNESLTRPFAVEEVKDALFAMHPDKSPGNDGFSPGFYQRHWEIVGEDVANAC 763

Query: 327  QKFFDVGEFPDHLSDTHICLIPKKSKPENMGDLRPIALCNVVYKVLSEVLANRRLKMVLP 148
              + + G FPD L+ T+I LIPKKS+  +M DLRPI+LCNV++K+ S++L N RLK VL 
Sbjct: 764  IGWLNDGMFPDSLTRTNIVLIPKKSEVISMTDLRPISLCNVIFKIASKLLTN-RLKKVLD 822

Query: 147  GVISESQSAFLPGRLISDNVMISFEVMHYLKRKSSGKRGFMAVKLDM 7
            GV+SE+QSAF+P R I DN++I+ EV+H+LKRK   + G+ A+K+D+
Sbjct: 823  GVVSEAQSAFVPRRSIIDNILIAHEVLHFLKRKRERRIGYAALKIDI 869


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  177 bits (449), Expect = 8e-43
 Identities = 86/169 (50%), Positives = 121/169 (71%)
 Frame = -3

Query: 507 ITQKITDDHNLLLMAPIEANEVRKALFQMHPDKSPGPDGFNPGFYQKYWDIVGKDVVNLV 328
           +  +ITD+    L AP    EV  AL QMHP+K+PGPDG N  FYQ +WD +G+DV   V
Sbjct: 421 VKPQITDELGTQLDAPFRREEVSAALAQMHPNKAPGPDGMNALFYQHFWDTIGEDVTTKV 480

Query: 327 QKFFDVGEFPDHLSDTHICLIPKKSKPENMGDLRPIALCNVVYKVLSEVLANRRLKMVLP 148
               +  +    ++ THI LIPKK   E+  D RPI+LCNV+YK++++VLAN R+KMVLP
Sbjct: 481 LNMLNNVDNIGAVNQTHIVLIPKKKHCESPVDFRPISLCNVLYKIVAKVLAN-RMKMVLP 539

Query: 147 GVISESQSAFLPGRLISDNVMISFEVMHYLKRKSSGKRGFMAVKLDMSE 1
            VI ESQS F+PGRLI+DNV++++E  H+L++K +GK+G++ +KLDMS+
Sbjct: 540 MVIHESQSGFVPGRLITDNVLVAYECFHFLRKKKTGKKGYLGLKLDMSK 588


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score =  172 bits (437), Expect = 2e-41
 Identities = 83/165 (50%), Positives = 118/165 (71%)
 Frame = -3

Query: 495 ITDDHNLLLMAPIEANEVRKALFQMHPDKSPGPDGFNPGFYQKYWDIVGKDVVNLVQKFF 316
           IT++ N  L   I   EV++ALF ++PDK+PGPDG    FYQ YWD+ G D++ LVQ F 
Sbjct: 363 ITEEMNKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWDLTGPDLIKLVQNFH 422

Query: 315 DVGEFPDHLSDTHICLIPKKSKPENMGDLRPIALCNVVYKVLSEVLANRRLKMVLPGVIS 136
             G F + L++T+ICLIPK  +P  M + RPI+LCNV YKV+S+VL++ RLK +LP +IS
Sbjct: 423 STGFFDERLNETNICLIPKTERPRKMAEFRPISLCNVSYKVISKVLSS-RLKRLLPELIS 481

Query: 135 ESQSAFLPGRLISDNVMISFEVMHYLKRKSSGKRGFMAVKLDMSE 1
           E+QSAF+  RLI+DN++I+ E  H L+   + K+ +MA+K DMS+
Sbjct: 482 ETQSAFVAERLITDNILIAQENFHALRTNPACKKKYMAIKTDMSK 526


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  171 bits (433), Expect = 6e-41
 Identities = 89/165 (53%), Positives = 116/165 (70%)
 Frame = -3

Query: 495 ITDDHNLLLMAPIEANEVRKALFQMHPDKSPGPDGFNPGFYQKYWDIVGKDVVNLVQKFF 316
           ITD  N LL A     EVR ALF +HP+K+PGPDG    F+QK W I+  D+++LV  F 
Sbjct: 200 ITDRINDLLTADATECEVRAALFMIHPEKAPGPDGMTALFFQKSWAIIKSDLLSLVNSFL 259

Query: 315 DVGEFPDHLSDTHICLIPKKSKPENMGDLRPIALCNVVYKVLSEVLANRRLKMVLPGVIS 136
             G F   L+ T+ICLIPK  +P  M +LRPI+LCNV YKV+S++L  +RLK VLP +IS
Sbjct: 260 QEGVFDKRLNTTNICLIPKTERPTRMTELRPISLCNVGYKVISKILC-QRLKTVLPNLIS 318

Query: 135 ESQSAFLPGRLISDNVMISFEVMHYLKRKSSGKRGFMAVKLDMSE 1
           E+QSAF+ GRLISDN++I+ E+ H L+  SS K  FMA+K DMS+
Sbjct: 319 ETQSAFVDGRLISDNILIAQEMFHGLRTNSSCKDKFMAIKTDMSK 363


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score =  168 bits (426), Expect = 4e-40
 Identities = 81/160 (50%), Positives = 114/160 (71%)
 Frame = -3

Query: 480 NLLLMAPIEANEVRKALFQMHPDKSPGPDGFNPGFYQKYWDIVGKDVVNLVQKFFDVGEF 301
           N  L   I   EV++ALF ++PDK+PGPDG    FYQ YWD+ G D++ LVQ F   G F
Sbjct: 2   NKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWDLTGPDLIKLVQNFHSTGFF 61

Query: 300 PDHLSDTHICLIPKKSKPENMGDLRPIALCNVVYKVLSEVLANRRLKMVLPGVISESQSA 121
            + L++T+ICLIPK  +P  M + RPI+LCNV YKV+S+VL++ RLK +LP +ISE+QSA
Sbjct: 62  DERLNETNICLIPKTERPRKMAEFRPISLCNVSYKVISKVLSS-RLKRLLPELISETQSA 120

Query: 120 FLPGRLISDNVMISFEVMHYLKRKSSGKRGFMAVKLDMSE 1
           F+  RLI+DN++I+ E  H L+   + K+ +MA+K DMS+
Sbjct: 121 FVAERLITDNILIAQENFHALRTNPACKKKYMAIKTDMSK 160


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