BLASTX nr result

ID: Angelica23_contig00044331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044331
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containi...    96   4e-18
emb|CBI25851.3| unnamed protein product [Vitis vinifera]               96   4e-18
emb|CAN68810.1| hypothetical protein VITISV_001082 [Vitis vinifera]    94   1e-17
ref|XP_002531466.1| pentatricopeptide repeat-containing protein,...    91   1e-16
ref|XP_004139002.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13

>ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Vitis vinifera]
          Length = 638

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/88 (52%), Positives = 64/88 (72%)
 Frame = +1

Query: 10  SLKFKNPIFAFSRTQFFSSSADQYWTQLQQNGPNIERSLSKIRVQLDSSCVTQVLQRCAV 189
           S++ KNP F+ +      SSA++Y+T LQ+ G NIE++L  +R +LDSSCV +VL RC++
Sbjct: 13  SIRHKNPNFSTAL-----SSAEKYYTHLQKYGDNIEKTLPAVRAKLDSSCVNEVLNRCSL 67

Query: 190 NQPVLGLRFFIWAAHQPNYRHTSYMYNK 273
            Q  LGLRFFIWA  Q  YRH+SY+Y+K
Sbjct: 68  TQSQLGLRFFIWAGVQSYYRHSSYLYSK 95


>emb|CBI25851.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/88 (52%), Positives = 64/88 (72%)
 Frame = +1

Query: 10  SLKFKNPIFAFSRTQFFSSSADQYWTQLQQNGPNIERSLSKIRVQLDSSCVTQVLQRCAV 189
           S++ KNP F+ +      SSA++Y+T LQ+ G NIE++L  +R +LDSSCV +VL RC++
Sbjct: 19  SIRHKNPNFSTAL-----SSAEKYYTHLQKYGDNIEKTLPAVRAKLDSSCVNEVLNRCSL 73

Query: 190 NQPVLGLRFFIWAAHQPNYRHTSYMYNK 273
            Q  LGLRFFIWA  Q  YRH+SY+Y+K
Sbjct: 74  TQSQLGLRFFIWAGVQSYYRHSSYLYSK 101


>emb|CAN68810.1| hypothetical protein VITISV_001082 [Vitis vinifera]
          Length = 577

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 45/88 (51%), Positives = 63/88 (71%)
 Frame = +1

Query: 10  SLKFKNPIFAFSRTQFFSSSADQYWTQLQQNGPNIERSLSKIRVQLDSSCVTQVLQRCAV 189
           S++ KNP F+ +      S A++Y+T LQ+ G NIE++L  +R +LDSSCV +VL RC++
Sbjct: 13  SIRHKNPNFSTAL-----SPAEKYYTHLQKYGDNIEKTLPAVRAKLDSSCVNEVLNRCSL 67

Query: 190 NQPVLGLRFFIWAAHQPNYRHTSYMYNK 273
            Q  LGLRFFIWA  Q  YRH+SY+Y+K
Sbjct: 68  TQSQLGLRFFIWAGVQSYYRHSSYLYSK 95


>ref|XP_002531466.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528920|gb|EEF30916.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 518

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 38/77 (49%), Positives = 58/77 (75%)
 Frame = +1

Query: 43  SRTQFFSSSADQYWTQLQQNGPNIERSLSKIRVQLDSSCVTQVLQRCAVNQPVLGLRFFI 222
           S   F +S AD+ +T LQ N  N+E+SL+ I+ +LD+ CVT+VL +C++N   +GLRFF+
Sbjct: 22  STLHFTTSLADKLYTHLQNNPNNVEKSLNSIKPKLDTRCVTEVLHKCSLNNSQIGLRFFV 81

Query: 223 WAAHQPNYRHTSYMYNK 273
           WA +Q NYRH+S++Y+K
Sbjct: 82  WAGYQSNYRHSSFLYSK 98


>ref|XP_004139002.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Cucumis sativus]
           gi|449505643|ref|XP_004162530.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g47360-like [Cucumis sativus]
          Length = 475

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 31/70 (44%), Positives = 53/70 (75%)
 Frame = +1

Query: 64  SSADQYWTQLQQNGPNIERSLSKIRVQLDSSCVTQVLQRCAVNQPVLGLRFFIWAAHQPN 243
           SS+D ++  L+++  N++++L+ ++ +LDS CV +VL +C+     +GLRFFIWA  QPN
Sbjct: 30  SSSDLFYDHLEKSNGNLDKTLATLKTKLDSRCVNEVLYKCSFELSQMGLRFFIWAGRQPN 89

Query: 244 YRHTSYMYNK 273
           YRH+S+MY++
Sbjct: 90  YRHSSFMYSR 99


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