BLASTX nr result

ID: Angelica23_contig00044282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044282
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vit...    67   1e-09
emb|CBI40154.3| unnamed protein product [Vitis vinifera]               67   1e-09
emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera]    67   1e-09
ref|NP_680129.1| F-box protein [Arabidopsis thaliana] gi|7518182...    62   4e-08
ref|XP_002877979.1| SNF2 domain-containing protein [Arabidopsis ...    62   4e-08

>ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vitis vinifera]
          Length = 1408

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = -2

Query: 160 DLVTEDGFALYLKMASGKIVTNRKPVVNYFRVGMFCGEPGLGKFKIALSLILK 2
           D +TEDGFA Y+   +G+IVT   P++  FR GMFC EPGLGK   ALSLILK
Sbjct: 362 DFLTEDGFAFYINTVTGEIVTGMPPLIRDFRGGMFCDEPGLGKTITALSLILK 414


>emb|CBI40154.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = -2

Query: 160 DLVTEDGFALYLKMASGKIVTNRKPVVNYFRVGMFCGEPGLGKFKIALSLILK 2
           D +TEDGFA Y+   +G+IVT   P++  FR GMFC EPGLGK   ALSLILK
Sbjct: 310 DFLTEDGFAFYINTVTGEIVTGMPPLIRDFRGGMFCDEPGLGKTITALSLILK 362


>emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera]
          Length = 1208

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/53 (60%), Positives = 38/53 (71%)
 Frame = -2

Query: 160 DLVTEDGFALYLKMASGKIVTNRKPVVNYFRVGMFCGEPGLGKFKIALSLILK 2
           D +TEDGFA Y+   +G+IVT   P++  FR GMFC EPGLGK   ALSLILK
Sbjct: 310 DFLTEDGFAFYINTVTGEIVTGMPPLIRDFRGGMFCDEPGLGKTITALSLILK 362


>ref|NP_680129.1| F-box protein [Arabidopsis thaliana]
           gi|75181828|sp|Q9M1I1.1|FB304_ARATH RecName: Full=F-box
           protein At3g54460 gi|7258349|emb|CAB77566.1| RING
           finger-like protein [Arabidopsis thaliana]
           gi|20259494|gb|AAM13867.1| unknown protein [Arabidopsis
           thaliana] gi|28393845|gb|AAO42330.1| unknown protein
           [Arabidopsis thaliana] gi|110742559|dbj|BAE99194.1| RING
           finger -like protein [Arabidopsis thaliana]
           gi|332645713|gb|AEE79234.1| F-box protein [Arabidopsis
           thaliana]
          Length = 1378

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = -2

Query: 151 TEDGFALYLKMASGKIVTNRKPVVNYFRVGMFCGEPGLGKFKIALSLILK 2
           TEDGF+ Y+   +G I+T   P+V  FR GMFC EPGLGK   ALSLILK
Sbjct: 361 TEDGFSFYVNAVTGDIITEAAPMVKDFRGGMFCDEPGLGKTITALSLILK 410


>ref|XP_002877979.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323817|gb|EFH54238.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1370

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = -2

Query: 151 TEDGFALYLKMASGKIVTNRKPVVNYFRVGMFCGEPGLGKFKIALSLILK 2
           TEDGF+ Y+   +G I+T   P+V  FR GMFC EPGLGK   ALSLILK
Sbjct: 353 TEDGFSFYVNAVTGDIITEAAPMVKDFRGGMFCDEPGLGKTITALSLILK 402


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