BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044171
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...   141   5e-32
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar...    83   3e-14
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c...    83   3e-14

>ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|222848569|gb|EEE86116.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  152 bits (385), Expect = 2e-35
 Identities = 68/133 (51%), Positives = 102/133 (76%)
 Frame = +3

Query: 12  SAVFSSVVDCYSKNGLFLQALEVFRIVKDCGYVVSDYSCNGLLNLLQERNEIGLCWCFYA 191
           S  FS V++CYS  GLF+++LE+FR ++  G++ S  +CN +L++LQ  NEI L WCFY 
Sbjct: 136 SDAFSFVLECYSHKGLFMESLEMFRKMRGNGFIASGTACNSVLDVLQRENEIKLAWCFYC 195

Query: 192 LMLRNGVLVSQFTWSVIARVLSKDGNFEKIGQVIDMGVYNSLMYNLIIEGYSKSGNFRAS 371
            M+++GVL  + TWS+IA++L KDGNFE+I + +DMGVYNS++YN +I+  SK G+F A+
Sbjct: 196 AMIKDGVLPDKLTWSLIAQILCKDGNFERIVKFLDMGVYNSVLYNGVIDCCSKRGDFEAA 255

Query: 372 SDRLNEMVDRKLE 410
            +RLN+M +RKL+
Sbjct: 256 FERLNQMCERKLD 268


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score =  141 bits (356), Expect = 5e-32
 Identities = 65/127 (51%), Positives = 95/127 (74%)
 Frame = +3

Query: 30  VVDCYSKNGLFLQALEVFRIVKDCGYVVSDYSCNGLLNLLQERNEIGLCWCFYALMLRNG 209
           V++ YS  G FL+ LEV++ ++  G   S ++CN LL+ LQ  +EI L WCFY  M+R G
Sbjct: 171 VLEFYSHKGSFLEGLEVYKKMRVIGCTPSVHACNVLLDALQRESEIRLAWCFYCAMIRVG 230

Query: 210 VLVSQFTWSVIARVLSKDGNFEKIGQVIDMGVYNSLMYNLIIEGYSKSGNFRASSDRLNE 389
           VL  +FTWS++A +L KDGNFE+I +++DMG+ NS+MYN +++ YSK+G+F+A+  RLNE
Sbjct: 231 VLPDKFTWSLVAHILCKDGNFERIVKLLDMGICNSVMYNAVVDYYSKNGDFKAAFCRLNE 290

Query: 390 MVDRKLE 410
           M DRK+E
Sbjct: 291 MYDRKVE 297


>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Vitis vinifera]
          Length = 569

 Score =  116 bits (290), Expect = 2e-24
 Identities = 63/137 (45%), Positives = 87/137 (63%), Gaps = 1/137 (0%)
 Frame = +3

Query: 3   DCHSAVFSSVVDCYSKNGLFLQALEVFRIVKDCGYVVSDYSCNGLLNLLQERNEIGLCWC 182
           D  S V   V++CYS  GLF++ALEVFR +   GYV S  SCN LL+ LQ  NEI L WC
Sbjct: 141 DSESPVLGFVLECYSSKGLFIEALEVFRRITIHGYVPSVRSCNALLDSLQRENEIKLAWC 200

Query: 183 FYALMLRNGVLVSQFTWSVIARVLSKDGNFEKIGQVIDMG-VYNSLMYNLIIEGYSKSGN 359
               ++RNGVL     +  IA +L K+G  E++ +++DM  V N+L+Y L+I+ Y + GN
Sbjct: 201 VCGALIRNGVLPD---YVRIALILCKNGKLERVVRLLDMSIVCNALIYKLVIDCYCERGN 257

Query: 360 FRASSDRLNEMVDRKLE 410
           F A+   LNEM +RK +
Sbjct: 258 FSAAFHYLNEMCNRKFD 274


>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332659015|gb|AEE84415.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 551

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/133 (31%), Positives = 75/133 (56%)
 Frame = +3

Query: 12  SAVFSSVVDCYSKNGLFLQALEVFRIVKDCGYVVSDYSCNGLLNLLQERNEIGLCWCFYA 191
           S   S V++ Y+  G     LEVF  ++      S  + N LL  L + N+  +  C Y+
Sbjct: 153 SVSLSLVLEYYALKGSHHNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQFRVALCLYS 212

Query: 192 LMLRNGVLVSQFTWSVIARVLSKDGNFEKIGQVIDMGVYNSLMYNLIIEGYSKSGNFRAS 371
            M+RNG++  + TW +IA++L + G  + + ++++ GV +  +Y  ++E YS++G F A 
Sbjct: 213 AMVRNGIVSDELTWDLIAQILCEQGRSKSVFKLMETGVESCKIYTNLVECYSRNGEFDAV 272

Query: 372 SDRLNEMVDRKLE 410
              ++EM D+KLE
Sbjct: 273 FSLIHEMDDKKLE 285


>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
          Length = 585

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/133 (31%), Positives = 75/133 (56%)
 Frame = +3

Query: 12  SAVFSSVVDCYSKNGLFLQALEVFRIVKDCGYVVSDYSCNGLLNLLQERNEIGLCWCFYA 191
           S   S V++ Y+  G     LEVF  ++      S  + N LL  L + N+  +  C Y+
Sbjct: 153 SVSLSLVLEYYALKGSHHNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKENQFRVALCLYS 212

Query: 192 LMLRNGVLVSQFTWSVIARVLSKDGNFEKIGQVIDMGVYNSLMYNLIIEGYSKSGNFRAS 371
            M+RNG++  + TW +IA++L + G  + + ++++ GV +  +Y  ++E YS++G F A 
Sbjct: 213 AMVRNGIVSDELTWDLIAQILCEQGRSKSVFKLMETGVESCKIYTNLVECYSRNGEFDAV 272

Query: 372 SDRLNEMVDRKLE 410
              ++EM D+KLE
Sbjct: 273 FSLIHEMDDKKLE 285