BLASTX nr result

ID: Angelica23_contig00044168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044168
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   100   9e-20
ref|XP_002531981.1| Protein gar2, putative [Ricinus communis] gi...    99   5e-19
gb|ABK24023.1| unknown [Picea sitchensis]                              95   5e-18
ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycin...    94   1e-17

>ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|296086279|emb|CBI31720.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  100 bits (250), Expect = 9e-20
 Identities = 45/62 (72%), Positives = 54/62 (87%)
 Frame = -1

Query: 191 VAEVIKITNSQESSDVSTKVYVGGIPYYSNEEDIRSFFESCGTITEVDCMRFPDTGKFRG 12
           V E  +I++SQE+ D S KVYVGGIPYYS E+DIRS+F+SCGTITEVDCM FP++GKFRG
Sbjct: 165 VKETAQISDSQENGDASNKVYVGGIPYYSTEDDIRSYFDSCGTITEVDCMMFPESGKFRG 224

Query: 11  IA 6
           IA
Sbjct: 225 IA 226


>ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
           gi|223528378|gb|EEF30417.1| Protein gar2, putative
           [Ricinus communis]
          Length = 436

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 4/68 (5%)
 Frame = -1

Query: 197 DRVAEVIKITN----SQESSDVSTKVYVGGIPYYSNEEDIRSFFESCGTITEVDCMRFPD 30
           D   EV + TN    SQ S D +TKVYVGGIPYYS EEDIRS+FE CGTITEVDCM FPD
Sbjct: 158 DEAKEVAEETNIISESQISEDSATKVYVGGIPYYSTEEDIRSYFEGCGTITEVDCMTFPD 217

Query: 29  TGKFRGIA 6
           +GKFRGIA
Sbjct: 218 SGKFRGIA 225


>gb|ABK24023.1| unknown [Picea sitchensis]
          Length = 302

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/56 (76%), Positives = 48/56 (85%)
 Frame = -1

Query: 173 ITNSQESSDVSTKVYVGGIPYYSNEEDIRSFFESCGTITEVDCMRFPDTGKFRGIA 6
           +  SQES+    KVYVGGIPYYSNE+DIRSFFE CGT+TEVDCM FPD+GKFRGIA
Sbjct: 65  LPQSQESNYDECKVYVGGIPYYSNEDDIRSFFEGCGTVTEVDCMTFPDSGKFRGIA 120


>ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|222865346|gb|EEF02477.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/63 (69%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
 Frame = -1

Query: 191 VAEVIKITN-SQESSDVSTKVYVGGIPYYSNEEDIRSFFESCGTITEVDCMRFPDTGKFR 15
           V E  K+   S+ S D++ +VYVGGIPYYS E+DIRSFFE CGTITEVDCM FPD+GKFR
Sbjct: 177 VVEAAKVAGESKISEDIADRVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSGKFR 236

Query: 14  GIA 6
           GIA
Sbjct: 237 GIA 239


>ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
          Length = 394

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/58 (74%), Positives = 50/58 (86%), Gaps = 3/58 (5%)
 Frame = -1

Query: 170 TNSQESSDV---STKVYVGGIPYYSNEEDIRSFFESCGTITEVDCMRFPDTGKFRGIA 6
           T SQ++ D    +TK+YVGGIPYYS E+DIRS+FESCGTITEVDCM FP+TGKFRGIA
Sbjct: 136 TTSQDNGDAPNTNTKIYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIA 193


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