BLASTX nr result

ID: Angelica23_contig00044138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044138
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]   152   2e-35
ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
ref|XP_002320305.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002515292.1| pentatricopeptide repeat-containing protein,...   147   9e-34
ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containi...   144   7e-33

>emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
          Length = 927

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/109 (65%), Positives = 88/109 (80%)
 Frame = +2

Query: 2   RKMLDDAVRIYKEMVLCGIQPNIDNHNIMMKSFFETRNFDMGFAAWEEMNQTGCCPNYIS 181
           R+M DDAVRIYK+M+  GIQP +  +N+MMKS+F TRN++MG A W+EM + GCCP+  S
Sbjct: 525 RQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKGCCPDDNS 584

Query: 182 YNLLIGGLIMQRRSVEACKYLEEMIQKGMTAPQIDYNKFSADCSRAGKP 328
           Y + IGGLI   RS EAC+YLEEMI+KGM APQ+DYNKF+AD SRAGKP
Sbjct: 585 YIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKP 633


>ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Vitis vinifera]
          Length = 679

 Score =  151 bits (381), Expect = 6e-35
 Identities = 71/109 (65%), Positives = 87/109 (79%)
 Frame = +2

Query: 2   RKMLDDAVRIYKEMVLCGIQPNIDNHNIMMKSFFETRNFDMGFAAWEEMNQTGCCPNYIS 181
           R+M DDAVRIYK+M+  GIQ  +  +N+MMKS+F TRN++MG A WEEM + GCCP+  S
Sbjct: 525 RQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKGCCPDDNS 584

Query: 182 YNLLIGGLIMQRRSVEACKYLEEMIQKGMTAPQIDYNKFSADCSRAGKP 328
           Y + IGGLI   RS EAC+YLEEMI+KGM APQ+DYNKF+AD SRAGKP
Sbjct: 585 YIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAGKP 633


>ref|XP_002320305.1| predicted protein [Populus trichocarpa] gi|222861078|gb|EEE98620.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  150 bits (378), Expect = 1e-34
 Identities = 69/109 (63%), Positives = 90/109 (82%)
 Frame = +2

Query: 2   RKMLDDAVRIYKEMVLCGIQPNIDNHNIMMKSFFETRNFDMGFAAWEEMNQTGCCPNYIS 181
           ++M DDAVRIYK+M+  GI+P+I ++N++MKS+F  RN++MG A W+EM++ G CP+  S
Sbjct: 396 QRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNS 455

Query: 182 YNLLIGGLIMQRRSVEACKYLEEMIQKGMTAPQIDYNKFSADCSRAGKP 328
           Y + IGGLI Q RS EACKYLEEMI+KGM APQ+DYNKF+AD SRAGKP
Sbjct: 456 YTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKP 504


>ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545772|gb|EEF47276.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/108 (62%), Positives = 85/108 (78%)
 Frame = +2

Query: 5   KMLDDAVRIYKEMVLCGIQPNIDNHNIMMKSFFETRNFDMGFAAWEEMNQTGCCPNYISY 184
           KM DDA RIYK+M   GI+P I  +N++MKS+F+TRN++MG A W+EM++ G CP+  SY
Sbjct: 386 KMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSY 445

Query: 185 NLLIGGLIMQRRSVEACKYLEEMIQKGMTAPQIDYNKFSADCSRAGKP 328
            +LIGGLI Q RS EACKYLEEM++KGM APQ+DYNKF AD SR G P
Sbjct: 446 TVLIGGLISQGRSGEACKYLEEMLEKGMKAPQLDYNKFGADLSRGGNP 493


>ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Cucumis sativus]
           gi|449490811|ref|XP_004158714.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g62470,
           mitochondrial-like [Cucumis sativus]
          Length = 621

 Score =  144 bits (363), Expect = 7e-33
 Identities = 67/109 (61%), Positives = 86/109 (78%)
 Frame = +2

Query: 2   RKMLDDAVRIYKEMVLCGIQPNIDNHNIMMKSFFETRNFDMGFAAWEEMNQTGCCPNYIS 181
           ++M DDAVRIYK+M+  GI+P    +++MMKS+F+TRN++MG AAW+EM   GCCP+  S
Sbjct: 465 KRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNS 524

Query: 182 YNLLIGGLIMQRRSVEACKYLEEMIQKGMTAPQIDYNKFSADCSRAGKP 328
           Y + IGGLI   R  EA KYLEEMI+KGM APQ+DYNKF+AD SRAG+P
Sbjct: 525 YTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRP 573


Top