BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044129
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...   203   1e-50
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm...   192   2e-47
gb|AAG52305.1|AC011020_12 putative DNA polymerase alpha subunit ...   187   8e-46
gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]            187   8e-46
ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana] g...   187   8e-46

>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
           gi|297738371|emb|CBI27572.3| unnamed protein product
           [Vitis vinifera]
          Length = 623

 Score =  203 bits (516), Expect = 1e-50
 Identities = 96/126 (76%), Positives = 110/126 (87%)
 Frame = +1

Query: 13  PAKKQALDQDLIQTDLSQMLPEISVLIAGGPFTTTDNLMFEPLNELLAYAHRKQPQLLIL 192
           PAKKQA D++    D S  L E+S+++A GPFTTTDNL+FEPL ELLAYA RK PQLLIL
Sbjct: 336 PAKKQARDEEFQSADSSHKLAELSLMVAAGPFTTTDNLLFEPLTELLAYARRKMPQLLIL 395

Query: 193 LGPFIDSEHPEIKKGTVNRTFDELFHHEILKRIQDYVEYMGSGARVILVPSIRDANHDFV 372
           LGPF+DSEHPEI+KGTV+R+FDE+FH EIL+R+QDYVEYMGS ARVILVPSIRDANHDFV
Sbjct: 396 LGPFVDSEHPEIRKGTVDRSFDEIFHLEILRRLQDYVEYMGSAARVILVPSIRDANHDFV 455

Query: 373 FPQPPF 390
           FPQP F
Sbjct: 456 FPQPAF 461


>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
           gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
           putative [Ricinus communis]
          Length = 621

 Score =  192 bits (489), Expect = 2e-47
 Identities = 97/129 (75%), Positives = 109/129 (84%)
 Frame = +1

Query: 4   NSQPAKKQALDQDLIQTDLSQMLPEISVLIAGGPFTTTDNLMFEPLNELLAYAHRKQPQL 183
           N  PAKKQALDQ+ I++  S    EISVLIA GPFTT DNLMFEPL ELLAYA RK PQL
Sbjct: 332 NLPPAKKQALDQE-IESIGSSCTQEISVLIASGPFTTLDNLMFEPLTELLAYASRKLPQL 390

Query: 184 LILLGPFIDSEHPEIKKGTVNRTFDELFHHEILKRIQDYVEYMGSGARVILVPSIRDANH 363
           LILLGPF+DSEHPEIKKGTV+ +FDE+F  EIL+R+QDYVEYMGS A+V++VPS RDANH
Sbjct: 391 LILLGPFVDSEHPEIKKGTVDGSFDEIFRQEILRRLQDYVEYMGSDAQVLIVPSTRDANH 450

Query: 364 DFVFPQPPF 390
           DFVFPQP F
Sbjct: 451 DFVFPQPAF 459


>gb|AAG52305.1|AC011020_12 putative DNA polymerase alpha subunit [Arabidopsis thaliana]
          Length = 620

 Score =  187 bits (475), Expect = 8e-46
 Identities = 88/127 (69%), Positives = 108/127 (85%), Gaps = 1/127 (0%)
 Frame = +1

Query: 13  PAKKQALDQD-LIQTDLSQMLPEISVLIAGGPFTTTDNLMFEPLNELLAYAHRKQPQLLI 189
           PAK+Q LDQ+ L+  + S    E+S +IA GPFTT+DNL+FEPLNELLAYA RK PQLL+
Sbjct: 336 PAKRQILDQEVLVPAEESCQKSEVSFIIASGPFTTSDNLLFEPLNELLAYAKRKPPQLLV 395

Query: 190 LLGPFIDSEHPEIKKGTVNRTFDELFHHEILKRIQDYVEYMGSGARVILVPSIRDANHDF 369
           LLGPF+DSEHPEIKKG V+ TF+E+F  E+L+++QDYVE+MGS  RV+LVPSIRDANHDF
Sbjct: 396 LLGPFVDSEHPEIKKGAVDATFNEIFQVEVLRKLQDYVEFMGSEVRVVLVPSIRDANHDF 455

Query: 370 VFPQPPF 390
           +FPQPPF
Sbjct: 456 IFPQPPF 462


>gb|AAG28895.1|AC008113_11 F12A21.24 [Arabidopsis thaliana]
          Length = 803

 Score =  187 bits (475), Expect = 8e-46
 Identities = 88/127 (69%), Positives = 108/127 (85%), Gaps = 1/127 (0%)
 Frame = +1

Query: 13  PAKKQALDQD-LIQTDLSQMLPEISVLIAGGPFTTTDNLMFEPLNELLAYAHRKQPQLLI 189
           PAK+Q LDQ+ L+  + S    E+S +IA GPFTT+DNL+FEPLNELLAYA RK PQLL+
Sbjct: 354 PAKRQILDQEVLVPAEESCQKSEVSFIIASGPFTTSDNLLFEPLNELLAYAKRKPPQLLV 413

Query: 190 LLGPFIDSEHPEIKKGTVNRTFDELFHHEILKRIQDYVEYMGSGARVILVPSIRDANHDF 369
           LLGPF+DSEHPEIKKG V+ TF+E+F  E+L+++QDYVE+MGS  RV+LVPSIRDANHDF
Sbjct: 414 LLGPFVDSEHPEIKKGAVDATFNEIFQVEVLRKLQDYVEFMGSEVRVVLVPSIRDANHDF 473

Query: 370 VFPQPPF 390
           +FPQPPF
Sbjct: 474 IFPQPPF 480


>ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
           gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2
           [Arabidopsis thaliana]
          Length = 620

 Score =  187 bits (475), Expect = 8e-46
 Identities = 88/127 (69%), Positives = 108/127 (85%), Gaps = 1/127 (0%)
 Frame = +1

Query: 13  PAKKQALDQD-LIQTDLSQMLPEISVLIAGGPFTTTDNLMFEPLNELLAYAHRKQPQLLI 189
           PAK+Q LDQ+ L+  + S    E+S +IA GPFTT+DNL+FEPLNELLAYA RK PQLL+
Sbjct: 336 PAKRQILDQEVLVPAEESCQKSEVSFIIASGPFTTSDNLLFEPLNELLAYAKRKPPQLLV 395

Query: 190 LLGPFIDSEHPEIKKGTVNRTFDELFHHEILKRIQDYVEYMGSGARVILVPSIRDANHDF 369
           LLGPF+DSEHPEIKKG V+ TF+E+F  E+L+++QDYVE+MGS  RV+LVPSIRDANHDF
Sbjct: 396 LLGPFVDSEHPEIKKGAVDATFNEIFQVEVLRKLQDYVEFMGSEVRVVLVPSIRDANHDF 455

Query: 370 VFPQPPF 390
           +FPQPPF
Sbjct: 456 IFPQPPF 462