BLASTX nr result

ID: Angelica23_contig00044093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00044093
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifer...    82   3e-14
emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]    82   3e-14
ref|XP_002327997.1| GRAS family transcription factor [Populus tr...    81   1e-13
ref|XP_003543573.1| PREDICTED: protein SHORT-ROOT-like [Glycine ...    78   6e-13
ref|XP_002309782.1| GRAS family transcription factor [Populus tr...    77   1e-12

>ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifera]
           gi|296081342|emb|CBI17688.3| unnamed protein product
           [Vitis vinifera]
          Length = 436

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 48/95 (50%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
 Frame = -1

Query: 280 LFTPKGTQFLQYDVNEHECNINGHHQVDMXXXXXXXXXXXXXXXXXXXXXXGDT--KWAS 107
           LFTPKGT F  +   +     NG  Q DM                           KWAS
Sbjct: 5   LFTPKGTYFFHHPTQQS----NGT-QPDMQSSNNQPQTSHTSTSRSSDSGEPCVTGKWAS 59

Query: 106 KLLKDCAKAISDKDSSKIHHLLWMLNELASPYGDC 2
            LLK+CA+AISDKDSS+IHHLLWMLNELASPYGDC
Sbjct: 60  SLLKECARAISDKDSSRIHHLLWMLNELASPYGDC 94


>emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]
          Length = 436

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 48/95 (50%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
 Frame = -1

Query: 280 LFTPKGTQFLQYDVNEHECNINGHHQVDMXXXXXXXXXXXXXXXXXXXXXXGDT--KWAS 107
           LFTPKGT F  +   +     NG  Q DM                           KWAS
Sbjct: 5   LFTPKGTYFFHHPTQQS----NGT-QPDMQSSNNQPQTSHTSTSRSSDSGEPCVTGKWAS 59

Query: 106 KLLKDCAKAISDKDSSKIHHLLWMLNELASPYGDC 2
            LLK+CA+AISDKDSS+IHHLLWMLNELASPYGDC
Sbjct: 60  SLLKECARAISDKDSSRIHHLLWMLNELASPYGDC 94


>ref|XP_002327997.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222837406|gb|EEE75785.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 411

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/39 (89%), Positives = 38/39 (97%)
 Frame = -1

Query: 118 KWASKLLKDCAKAISDKDSSKIHHLLWMLNELASPYGDC 2
           KWASKLL +CA+AIS+KDSSKIHHLLWMLNELASPYGDC
Sbjct: 35  KWASKLLSECARAISEKDSSKIHHLLWMLNELASPYGDC 73


>ref|XP_003543573.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
          Length = 443

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = -1

Query: 124 DTKWASKLLKDCAKAISDKDSSKIHHLLWMLNELASPYGDC 2
           D KWA KLL++CAKAIS++DS+K HHLLWMLNELASPYGDC
Sbjct: 62  DGKWAPKLLRECAKAISERDSTKTHHLLWMLNELASPYGDC 102


>ref|XP_002309782.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222852685|gb|EEE90232.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 411

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/39 (84%), Positives = 38/39 (97%)
 Frame = -1

Query: 118 KWASKLLKDCAKAISDKDSSKIHHLLWMLNELASPYGDC 2
           KWAS+LL +CA+AIS+KDSSKIH+LLWMLNELASPYGDC
Sbjct: 35  KWASRLLSECARAISEKDSSKIHNLLWMLNELASPYGDC 73


Top