BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00043431
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   130   1e-28
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   125   3e-27
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   125   5e-27
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   119   3e-25
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   113   1e-23

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/123 (54%), Positives = 84/123 (68%), Gaps = 6/123 (4%)
 Frame = +1

Query: 1   PSIASDYWDFLQNDPLEEGNAFKPYERSLSHAQVQELLKGINPKFIEDFVKGKNNLISMN 180
           P +  DYWDF+  DP +E N   P  R LSHAQV  LLK I+P FI++FV   ++   +N
Sbjct: 206 PVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFF-LN 264

Query: 181 NFPVTPNSHRVNEC------GQQMRFDERTRFYRKLVDFKGSANELSARVLDCLKMSKLK 342
             PVTPN+HRV E       GQ + FD+ +R Y+KLVDF+G+ANELS RVLDCLK SKL+
Sbjct: 265 CLPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKLR 324

Query: 343 SEK 351
           SEK
Sbjct: 325 SEK 327


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
           sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
           QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
           1-like [Cucumis sativus]
          Length = 1469

 Score =  125 bits (315), Expect = 3e-27
 Identities = 63/116 (54%), Positives = 85/116 (73%), Gaps = 6/116 (5%)
 Frame = +1

Query: 7   IASDYWDFLQNDPLEEGNAFKPYERSLSHAQVQELLKGINPKFIEDFVKGKNNLISMNNF 186
           + SDYWDF+  D  +E +  +P  + L+HAQV  LLK I+PKF++ FV   ++L  +N+F
Sbjct: 175 LPSDYWDFIPKDEQQEESYCRPNRKILTHAQVHYLLKDIDPKFLKKFVPAIDSLF-LNSF 233

Query: 187 PVTPNSHRVNEC------GQQMRFDERTRFYRKLVDFKGSANELSARVLDCLKMSK 336
           PVTPNSHRV E       GQ++ FDERTR Y+K+VDF+G+ANEL +RVLDCLK+SK
Sbjct: 234 PVTPNSHRVTEMAHSFSNGQRLIFDERTRAYKKVVDFRGTANELGSRVLDCLKISK 289


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  125 bits (313), Expect = 5e-27
 Identities = 67/126 (53%), Positives = 84/126 (66%), Gaps = 9/126 (7%)
 Frame = +1

Query: 1   PSIASDYWDFLQNDPLEEGNAFKPYERSLSHAQVQELLKGINPKFIEDFVKGKNNLISMN 180
           P +  DYWDF+  DP +E N   P  R LSHAQV  LLK I+P FI++FV   ++   +N
Sbjct: 173 PVLPLDYWDFIPKDPQQEENCLNPNRRVLSHAQVHYLLKDIDPGFIKEFVSRMDSFF-LN 231

Query: 181 NFPVTPNSHRVNEC------GQQMRFDERTRFYRKLVDFKGSANELSARVLDCLKMSK-- 336
             PVTPN+HRV E       GQ + FD+ +R Y+KLVDF+G+ANELS RVLDCLK SK  
Sbjct: 232 CLPVTPNNHRVTEITHALSNGQTLIFDQHSRAYKKLVDFRGTANELSCRVLDCLKTSKAS 291

Query: 337 -LKSEK 351
            L+SEK
Sbjct: 292 NLRSEK 297


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 1475

 Score =  119 bits (298), Expect = 3e-25
 Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 6/121 (4%)
 Frame = +1

Query: 7   IASDYWDFLQNDPLEEGNAFKPYERSLSHAQVQELLKGINPKFIEDFVKGKNNLISMNNF 186
           +A+DYWD +  D  +E N  +P +R LSHAQV  LL+ I+P FI  FV  K + I +N F
Sbjct: 170 LAADYWDIIPKDEQQEENITRPNQRVLSHAQVIHLLENIDPNFIRKFVL-KRDSIFLNCF 228

Query: 187 PVTPNSHRVNEC------GQQMRFDERTRFYRKLVDFKGSANELSARVLDCLKMSKLKSE 348
            VTPN HRV E       GQ++ FD+RTR Y+K+VDF+G A ELS RVLDCLK SK+  +
Sbjct: 229 SVTPNCHRVTEVTHAFSNGQRLVFDDRTRAYKKMVDFRGIAKELSFRVLDCLKTSKINPD 288

Query: 349 K 351
           K
Sbjct: 289 K 289


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
           gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
           [Populus trichocarpa]
          Length = 1517

 Score =  113 bits (283), Expect = 1e-23
 Identities = 62/123 (50%), Positives = 80/123 (65%), Gaps = 8/123 (6%)
 Frame = +1

Query: 7   IASDYWDFLQNDPLEEGNAF--KPYERSLSHAQVQELLKGINPKFIEDFVKGKNNLISMN 180
           +A+DYWD    D  EE      KP  R LSH+QV+ +LK ++P FI+  +  K + I +N
Sbjct: 201 LAADYWDIFPKDEQEEEEETNAKPNRRVLSHSQVRHMLKDVDPNFIKLSIL-KTDTIFLN 259

Query: 181 NFPVTPNSHRVNEC------GQQMRFDERTRFYRKLVDFKGSANELSARVLDCLKMSKLK 342
            FPVTPNSHRV E       GQ++ FDERTR Y+K+VDF+G AN LS  V+DCLK SKL 
Sbjct: 260 CFPVTPNSHRVTEVTHAFSNGQRLIFDERTRAYKKMVDFRGVANTLSFHVMDCLKTSKLN 319

Query: 343 SEK 351
            +K
Sbjct: 320 PDK 322